| New model in OGS2.0 | DPOGS212700 |
|---|---|
| Genomic Position | scaffold3:- 472010-473523 |
| See gene structure | |
| CDS Length | 774 |
| Paired RNAseq reads | 80 |
| Single RNAseq reads | 307 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013165 (7e-43) |
| Best Drosophila hit | radiation insensitive 1 (3e-36) |
| Best Human hit | cell cycle checkpoint protein RAD1 (2e-35) |
| Best NR hit (blastp) | checkpoint protein [Culex quinquefasciatus] (3e-45) |
| Best NR hit (blastx) | checkpoint protein [Culex quinquefasciatus] (6e-44) |
| GeneOntology terms | GO:0003684 damaged DNA binding GO:0006281 DNA repair GO:0005634 nucleus GO:0008853 exodeoxyribonuclease III activity |
| InterPro families | IPR003021 Repair protein Rad1/Rec1 IPR003011 Repair protein Rad1 |
| Orthology group | MCL12718 |
Nucleotide sequence:
ATGGACTCGGGTAAAACATTGTACAACATATTGAAATCCATACAATTTCAAGAGTGCGCA
GTATTTTGTGCTATGCAGGAAGGTCTGAAACTCACAGTGGAAGAAGGAAAATGTGTCCAA
GCCTCAGCATATATCCCGTCGGACAATTTCACTGAGTACCATGTTAGAGACGATGTTGAT
GTTTTGTTTAAAATAAACATATCTGTGTTGACTGAATGTCTCAATATATTCGGAGCGAAC
GAAGATTCCAGTTTGAAGATGTACTACAGATGCGAGGGCTCCCCTTTACTGCTCGTCCTT
CAACCCCAATCGATGATCAATGTGATGACAGATTGCGAGATAGCAACACAGATTGCCGAC
TCAATACTGGAGTTGAGAGATGAAGATGTGCCAGAAGTAGCTAAGCTAGTATTGAAGGCT
TCAGCGTTTATGGGGCTGTTGGCGGACTTGGAACGCTCCTGTGATACTATCGAGATTAAT
CTCTCCCCAGAACATCCTAATGTCAGCATTATTACATACGGAATGCAGGATAGGTCTTGT
ATAGATGTACCTAAGTCTTCGGACATGGTGCAGAGTTTTAGCTGCAGACAAGCAATCAGG
CTGAAGTACCAGTTGTACCATCTCAGACTCACTATGAAAGCGTTGGCTATATCTTCAAAG
GTAGTGTTACGTTCCAGTTCAAACGGTCTCCTCCTGATACAGCTGAAGCTCGAGAAGGAA
GATCAAAGACAAATGTTCACAGAATTCTTCATATTGCCCTTATTGGATGACTAG
Protein sequence:
MDSGKTLYNILKSIQFQECAVFCAMQEGLKLTVEEGKCVQASAYIPSDNFTEYHVRDDVD
VLFKINISVLTECLNIFGANEDSSLKMYYRCEGSPLLLVLQPQSMINVMTDCEIATQIAD
SILELRDEDVPEVAKLVLKASAFMGLLADLERSCDTIEINLSPEHPNVSIITYGMQDRSC
IDVPKSSDMVQSFSCRQAIRLKYQLYHLRLTMKALAISSKVVLRSSSNGLLLIQLKLEKE
DQRQMFTEFFILPLLDD