New model in OGS2.0 | DPOGS212705  |
---|---|
Genomic Position | scaffold3:- 393417-397537 |
See gene structure | |
CDS Length | 912 |
Paired RNAseq reads   | 1090 |
Single RNAseq reads   | 2905 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA013268 (3e-72) |
Best Drosophila hit   | CG11550 (4e-41) |
Best Human hit | clavesin-1 (7e-10) |
Best NR hit (blastp)   | PREDICTED: similar to GA11062-PA [Nasonia vitripennis] (6e-59) |
Best NR hit (blastx)   | PREDICTED: similar to CG11550-PA [Apis mellifera] (5e-54) |
GeneOntology terms   | GO:0008431 vitamin E binding |
InterPro families    | IPR001251 Cellular retinaldehyde-binding/triple function, C-terminal IPR001071 Cellular retinaldehyde binding/alpha-tocopherol transport |
Orthology group | MCL10184 |
Nucleotide sequence:
ATGCCGAGTAAAGTGATCGAGCAGCGGCCGTTGGATGAAGAGTATGAAAAAACCGGCGTC
AGTCCATCAGACATCGCGGCTCTGAGACAATGGCTGAAAACCCAGCCCCATCTACCGGAT
AAATACATCACTGATATGGAACTCATCCTGGCGTATCACAGCTGCTACAAAAGTTCGGAA
GTGTCCAAACAGGTTATTGATCTACATTACACCTTGAGGACGCTCTTCACAAATCTCTTC
CACAACAGACTCGTCGATGACAGCTTCATCAGGACTATGAACGTCATTCTGGGTTTCCCC
ATCGAGACGAGAACGTCCAAAGACTACAAGGTCGTCTACTTTAGGCTCATTGACTACGAT
GCGAAGAATTTTATTTTCTCTGAAGCAGTTAGGGCGGCTATAATGCTTATAGACTTGATG
CAGTACGAGGATGGAGCATGGAAAGGGTTCGTCATTATAATAGACCTAAACCGCGTCACT
CTGGGCCACATCGCTAGACTAGACCTGCAAACTATACAGCAGCTGCTATATTACTTACAG
GAAGCGATGCTAGTGAGGCTGAAAGGTCTACACTTCCTGAACGCTCCGTCTTTCATGGAT
CGCCTGATGATGCTGCTGCGGCCGTTCATGAAGAAGGAGCTCATGGAAATGCTCAAGATA
CACCAGGTCGGAGCCACGACCCTCGAAGAAACGATCCCCATAGACGCCCTGCCGAAAGAA
GCCGGCGGAAAGAGTAACAGCTTCCAAGAAATCAAAAACGAAATAATTGACAAGTTAATA
GCCAATAAAAACTTCTTCGTCGACGAAAACAAGCGGAGAGTGACAGAGTCATTGCGCCCT
GGGAAGCCGAAGACAATAACTGATATATTTGGCGGAATCGAAGGATCGTTTAAGAAACTC
GACATAGATTAA
Protein sequence:
MPSKVIEQRPLDEEYEKTGVSPSDIAALRQWLKTQPHLPDKYITDMELILAYHSCYKSSE
VSKQVIDLHYTLRTLFTNLFHNRLVDDSFIRTMNVILGFPIETRTSKDYKVVYFRLIDYD
AKNFIFSEAVRAAIMLIDLMQYEDGAWKGFVIIIDLNRVTLGHIARLDLQTIQQLLYYLQ
EAMLVRLKGLHFLNAPSFMDRLMMLLRPFMKKELMEMLKIHQVGATTLEETIPIDALPKE
AGGKSNSFQEIKNEIIDKLIANKNFFVDENKRRVTESLRPGKPKTITDIFGGIEGSFKKL
DID