New model in OGS2.0 | DPOGS212706  |
---|---|
Genomic Position | scaffold3:- 383263-389516 |
See gene structure | |
CDS Length | 957 |
Paired RNAseq reads   | 3739 |
Single RNAseq reads   | 12382 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA013159 (4e-80) |
Best Drosophila hit   | CG11550 (2e-49) |
Best Human hit | alpha-tocopherol transfer protein-like (2e-12) |
Best NR hit (blastp)   | PREDICTED: similar to CG11550-PA [Apis mellifera] (9e-55) |
Best NR hit (blastx)   | PREDICTED: similar to CG11550-PA [Apis mellifera] (1e-55) |
GeneOntology terms    | GO:0008431 vitamin E binding GO:0006810 transport GO:0005215 transporter activity GO:0005622 intracellular |
InterPro families    | IPR001251 Cellular retinaldehyde-binding/triple function, C-terminal IPR001071 Cellular retinaldehyde binding/alpha-tocopherol transport |
Orthology group | MCL10184 |
Nucleotide sequence:
ATGCTCATACGAGCAGTTTCGGTTTTTTGTGTAACCACTTCACTACAAATGACGTCACAA
GACGTTCAACCGATATCTTTGGAGGAAGAGTACAGAAAGAAGACAGGGATCAGTCCAGAA
GATATACAGAAGTTACGTAGTTGGATGCAGACACAGCCGCATCTGCCAGAGAATTATATT
ACAGATTTAGATTTAATCCTGGCGTTCCATTCCTGCGACTGTAGTTCGGGCCTAACGAAG
CAAGTGCTGGACACACATTACACTTTGAGGACTTTGTTCCCCTGCTTCAAGGACCGCAGA
GTAGATCAAGTCATAGAGACGGCCGAAACGGTGCTCCTGATACCTTTGCCGACGCCAGCA
AAGCATGGGTACAAAATAAACTACAGTCACGTTCTAAAAACAGATCCAAAATCTTTCAAT
TTTAGCGAAACAGTTAAGGCGTTGTTTATGATAATAGATGTTTACCAGTACGAAGAAGGA
ACATGGCCTGGATTTCTATTTGTTGTAGACTTTGAAGGTATCTCCCTAGGTCATTTAGGC
AAGATAGACTTGCAAAGTTTACAACATGTACTATATTTTCTTCAGGAGGCTATGCTGGTT
AAATTAAAGGGCATGCACTTCATCAACGCACCGTCCTTCATCGATAAACTTTTATTGATG
ATGAGGCCTTTCTTGAAAAAGGAACTCATGGATATGTTACACATCCATACAACCGGATCT
AACAAACTACAAAATTTTATTGACATAGAAGCCCTGCCAAAAGAAGCTGGCGGCTCGTAC
AAAAGCATTCACGGATGTAAAGATGACGTCATAGCCAAGTTGAAAAAACATGCAGATTTT
TTCGAAAAAGAAAAATACAAACGTGTTACGGAATCTCTGAGACCTGGAAGACCTAAAACG
ATAACAGATATCTTCGGAGGAATCGAAGGCTCCTTCAAGAAGCTGGAAATAGATTGA
Protein sequence:
MLIRAVSVFCVTTSLQMTSQDVQPISLEEEYRKKTGISPEDIQKLRSWMQTQPHLPENYI
TDLDLILAFHSCDCSSGLTKQVLDTHYTLRTLFPCFKDRRVDQVIETAETVLLIPLPTPA
KHGYKINYSHVLKTDPKSFNFSETVKALFMIIDVYQYEEGTWPGFLFVVDFEGISLGHLG
KIDLQSLQHVLYFLQEAMLVKLKGMHFINAPSFIDKLLLMMRPFLKKELMDMLHIHTTGS
NKLQNFIDIEALPKEAGGSYKSIHGCKDDVIAKLKKHADFFEKEKYKRVTESLRPGRPKT
ITDIFGGIEGSFKKLEID