| New model in OGS2.0 | DPOGS212708 |
|---|---|
| Genomic Position | scaffold3:- 355216-358024 |
| See gene structure | |
| CDS Length | 804 |
| Paired RNAseq reads | 6489 |
| Single RNAseq reads | 17801 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013131 (9e-86) |
| Best Drosophila hit | glial lazarillo (1e-09) |
| Best Human hit | apolipoprotein D precursor (1e-15) |
| Best NR hit (blastp) | PREDICTED: similar to apolipoprotein D [Tribolium castaneum] (2e-92) |
| Best NR hit (blastx) | PREDICTED: similar to apolipoprotein D [Tribolium castaneum] (1e-89) |
| GeneOntology terms | GO:0005576 extracellular region GO:0005615 extracellular space GO:0008289 lipid binding GO:0005319 lipid transporter activity GO:0005515 protein binding GO:0006629 lipid metabolic process GO:0005215 transporter activity GO:0005501 retinoid binding |
| InterPro families | IPR011038 Calycin-like IPR000566 Lipocalin/cytosolic fatty-acid binding protein IPR012674 Calycin IPR003057 Invertebrate colouration protein |
| Orthology group | MCL16805 |
Nucleotide sequence:
ATGTATCTCGTATCAATATATTTGTTGTTAGCGCTATGTGGCAGCGCAATATCTCATACT
TACCACCTGGGAGCTTGCCCCGTTGTGGAGCCGATGCCGGGATTCGACATGAATCAGATG
TTGGGAGTGTGGTATGTGATCCAGAAGACGTCGACGGCTTCCCACTGCATCACGTACAAT
TTCACAAGAACAGACGAGCCTGGACGCTACGAGCTGGAGCAGCTCTCGCAGCACTTCATC
CTGGGCTTGACTCCGTTAAATCACGACTATAGATACACTGGTATTCTGACAGTCCCCGAT
CCTGCAGTGCCAGCACGAATGAAAGTTAATTTCCCGTTAAGTGTCGCTGGATCCGCTAGT
TATACAATCATGGCCACAGATTATACAAACTACGCCGCTATATTCACGTGCCAGAAACTG
GCGTTCGCCCATCGCCGATCAGCAACCATACTCTCCAGGCACAAGGAGTTGGATAAAATG
TACGTGGATAAGATGCGAGCTAAGTTATCGTCGTTTGGCGTGGACCCGTACGATCTGTCG
ATAATATCACAGACGGAATGCCCAAAACATCCCAACGGGACGAGCAACGGCGTTAACATC
AACATAGATCCCGAGACCTTCTCATCACACAACATAGGAGAAGCCGTCAGACAAACCGGC
ACAGTCATCGCTGACGGTGTGGAGTACGTGGTTGATGCTGGGAAGAAGGTTTACAACAAG
GTCACCAGCAGCAAGGAAGACCTTACAGAGAGTCCCGACAAGCCAGTCCGTTCCCTCAAA
GATGACGCAGAATGGCTGCCTTAA
Protein sequence:
MYLVSIYLLLALCGSAISHTYHLGACPVVEPMPGFDMNQMLGVWYVIQKTSTASHCITYN
FTRTDEPGRYELEQLSQHFILGLTPLNHDYRYTGILTVPDPAVPARMKVNFPLSVAGSAS
YTIMATDYTNYAAIFTCQKLAFAHRRSATILSRHKELDKMYVDKMRAKLSSFGVDPYDLS
IISQTECPKHPNGTSNGVNINIDPETFSSHNIGEAVRQTGTVIADGVEYVVDAGKKVYNK
VTSSKEDLTESPDKPVRSLKDDAEWLP