New model in OGS2.0 | DPOGS212708  |
---|---|
Genomic Position | scaffold3:- 355216-358024 |
See gene structure | |
CDS Length | 804 |
Paired RNAseq reads   | 6489 |
Single RNAseq reads   | 17801 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA013131 (9e-86) |
Best Drosophila hit   | glial lazarillo (1e-09) |
Best Human hit | apolipoprotein D precursor (1e-15) |
Best NR hit (blastp)   | PREDICTED: similar to apolipoprotein D [Tribolium castaneum] (2e-92) |
Best NR hit (blastx)   | PREDICTED: similar to apolipoprotein D [Tribolium castaneum] (1e-89) |
GeneOntology terms    | GO:0005576 extracellular region GO:0005615 extracellular space GO:0008289 lipid binding GO:0005319 lipid transporter activity GO:0005515 protein binding GO:0006629 lipid metabolic process GO:0005215 transporter activity GO:0005501 retinoid binding |
InterPro families    | IPR011038 Calycin-like IPR000566 Lipocalin/cytosolic fatty-acid binding protein IPR012674 Calycin IPR003057 Invertebrate colouration protein |
Orthology group | MCL16805 |
Nucleotide sequence:
ATGTATCTCGTATCAATATATTTGTTGTTAGCGCTATGTGGCAGCGCAATATCTCATACT
TACCACCTGGGAGCTTGCCCCGTTGTGGAGCCGATGCCGGGATTCGACATGAATCAGATG
TTGGGAGTGTGGTATGTGATCCAGAAGACGTCGACGGCTTCCCACTGCATCACGTACAAT
TTCACAAGAACAGACGAGCCTGGACGCTACGAGCTGGAGCAGCTCTCGCAGCACTTCATC
CTGGGCTTGACTCCGTTAAATCACGACTATAGATACACTGGTATTCTGACAGTCCCCGAT
CCTGCAGTGCCAGCACGAATGAAAGTTAATTTCCCGTTAAGTGTCGCTGGATCCGCTAGT
TATACAATCATGGCCACAGATTATACAAACTACGCCGCTATATTCACGTGCCAGAAACTG
GCGTTCGCCCATCGCCGATCAGCAACCATACTCTCCAGGCACAAGGAGTTGGATAAAATG
TACGTGGATAAGATGCGAGCTAAGTTATCGTCGTTTGGCGTGGACCCGTACGATCTGTCG
ATAATATCACAGACGGAATGCCCAAAACATCCCAACGGGACGAGCAACGGCGTTAACATC
AACATAGATCCCGAGACCTTCTCATCACACAACATAGGAGAAGCCGTCAGACAAACCGGC
ACAGTCATCGCTGACGGTGTGGAGTACGTGGTTGATGCTGGGAAGAAGGTTTACAACAAG
GTCACCAGCAGCAAGGAAGACCTTACAGAGAGTCCCGACAAGCCAGTCCGTTCCCTCAAA
GATGACGCAGAATGGCTGCCTTAA
Protein sequence:
MYLVSIYLLLALCGSAISHTYHLGACPVVEPMPGFDMNQMLGVWYVIQKTSTASHCITYN
FTRTDEPGRYELEQLSQHFILGLTPLNHDYRYTGILTVPDPAVPARMKVNFPLSVAGSAS
YTIMATDYTNYAAIFTCQKLAFAHRRSATILSRHKELDKMYVDKMRAKLSSFGVDPYDLS
IISQTECPKHPNGTSNGVNINIDPETFSSHNIGEAVRQTGTVIADGVEYVVDAGKKVYNK
VTSSKEDLTESPDKPVRSLKDDAEWLP