| New model in OGS2.0 | DPOGS212712 |
|---|---|
| Genomic Position | scaffold3:- 265696-270565 |
| See gene structure | |
| CDS Length | 1200 |
| Paired RNAseq reads | 619 |
| Single RNAseq reads | 1704 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013255 (0.0) |
| Best Drosophila hit | Snf5-related 1 (5e-149) |
| Best Human hit | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 isoform b (7e-128) |
| Best NR hit (blastp) | PREDICTED: similar to ENSANGP00000012094 [Nasonia vitripennis] (2e-180) |
| Best NR hit (blastx) | PREDICTED: similar to ENSANGP00000012094 [Nasonia vitripennis] (3e-161) |
| GeneOntology terms | GO:0016251 general RNA polymerase II transcription factor activity GO:0045449 regulation of transcription GO:0005634 nucleus GO:0003702 RNA polymerase II transcription factor activity GO:0045893 positive regulation of transcription, DNA-dependent GO:0035060 brahma complex GO:0003713 transcription coactivator activity GO:0002165 instar larval or pupal development GO:0001700 embryonic development via the syncytial blastoderm GO:0070984 SET domain binding GO:0008285 negative regulation of cell proliferation GO:0000228 nuclear chromosome GO:0006338 chromatin remodeling GO:0007474 imaginal disc-derived wing vein specification GO:0008544 epidermis development GO:0007517 muscle organ development GO:0048813 dendrite morphogenesis GO:0008586 imaginal disc-derived wing vein morphogenesis GO:0008587 imaginal disc-derived wing margin morphogenesis |
| InterPro families | IPR006939 SNF5/SMARCB1/INI1 |
| Orthology group | MCL14465 |
Nucleotide sequence:
ATGGCTCTTCGGACTTACGGCGACAAGCCGATCAGTTTCCAAATTGAAGAAGGTGGTGAA
TTCTACTGTGTTGGATCGGAGGTTGGTAATTATCTGCGGCTCTTCCGCGGGTCATTGTAT
AAGAAGTACCCTGGCATGGCCAGGCGGACTCTCACAAATGAAGAGAGGAAACGTTTAGTT
GACAACGGTCTGGGTCCACATGTGCTGTCGAGCTCTGTTTCGTTGTTGAAAGCCTCGGAA
GTTGAAGACATCATTGATGGCAATGACGAAAAGTACAAAGCTGTGTCAGTCAGTCAAGAG
TTGGCAACACCTAGGGAGGGTAAGGCCAAGAAACCTCACAACCCTCCATGGATGCCGGCC
ATGCCGAACTCTTCTCATCTGGATGCTGTACCTCAAGCTACACCGATTAGCAGAACGAGA
GTGCACAATAAAAAGGTTAGGACGTTCCCGCTCTGCTTCGATGACACTGACATGACCGCC
ATGTTGGAGAACGCTTCTCAGAAGCAAGTGCTCGTACCCATCAGATTGGACATGGAAATC
GAAGGCCAGAAGCTCAGGGATACATTCACATGGAACAAAAATGAGTCTATTATAACACCG
GAGCAGTTTGCTGAAGTCCTGTGCGACGATTTGGAACTGAACACCAGTACGTTCATCCCG
GCCATAGCCTCGTCCATCAGACAGCAGATCGAGGCTTTCCCCAGTGAACCACCTCCCATA
CTCGAGGAGTTGGACCAGAGAGTCATCATCAAACTCAATATACACGTCGGGAACACGTCT
CTGGTCGATCAGGTGGAGTGGGATATGGCTGAGAAGGAGAACAATCCGGAACAGTTCGCC
ATGAAGCTGTGCGCCGAGCTCGGCCTGGGCGGGGAGTTCGTGACGGGAATCGCTTACAGT
GTCAGGGGACAACTTAGCTGGCATCAGAGGACCTACGCCTTCAGCGAGGCCCCGTTACCT
GTCGTTGAGACACCGTACCGCCAGCCCTCGGATGCTGAACAGTGGGCGCCATATCTGGAA
ACGCTAACTAACGCTGAAATGGAGAAAAAGATCAGGGATCAGGACAGGAACACGAGGAGA
ATGAGACGTCTAGCAAACACAACGCCCGATGCGTCATTGACCCGCGCGGTCAACCGTCTG
ATGCGAGTGGACGAAGCTCTCTTCACCAACACACCGGATAAGAGGCGGAAAAAAATATAA
Protein sequence:
MALRTYGDKPISFQIEEGGEFYCVGSEVGNYLRLFRGSLYKKYPGMARRTLTNEERKRLV
DNGLGPHVLSSSVSLLKASEVEDIIDGNDEKYKAVSVSQELATPREGKAKKPHNPPWMPA
MPNSSHLDAVPQATPISRTRVHNKKVRTFPLCFDDTDMTAMLENASQKQVLVPIRLDMEI
EGQKLRDTFTWNKNESIITPEQFAEVLCDDLELNTSTFIPAIASSIRQQIEAFPSEPPPI
LEELDQRVIIKLNIHVGNTSLVDQVEWDMAEKENNPEQFAMKLCAELGLGGEFVTGIAYS
VRGQLSWHQRTYAFSEAPLPVVETPYRQPSDAEQWAPYLETLTNAEMEKKIRDQDRNTRR
MRRLANTTPDASLTRAVNRLMRVDEALFTNTPDKRRKKI