New model in OGS2.0 | DPOGS212715  |
---|---|
Genomic Position | scaffold3:- 119356-144824 |
See gene structure | |
CDS Length | 5151 |
Paired RNAseq reads   | 133 |
Single RNAseq reads   | 336 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA013258 (0.0) |
Best Drosophila hit   | CNG channel-like, isoform B (0.0) |
Best Human hit | cyclic nucleotide-gated cation channel alpha-3 isoform 2 (4e-105) |
Best NR hit (blastp)   | cyclic-nucleotide-gated cation channel [Culex quinquefasciatus] (0.0) |
Best NR hit (blastx)   | cyclic-nucleotide-gated cation channel [Aedes aegypti] (0.0) |
GeneOntology terms    | GO:0005221 intracellular cyclic nucleotide activated cation channel activity GO:0016020 membrane GO:0055085 transmembrane transport GO:0006811 ion transport |
InterPro families    | IPR000595 Cyclic nucleotide-binding domain IPR018490 Cyclic nucleotide-binding-like IPR005821 Ion transport IPR018488 Cyclic nucleotide-binding, conserved site IPR014710 RmlC-like jelly roll fold |
Orthology group | MCL11333 |
Nucleotide sequence:
ATGAAGTTGAGAACAACGGTCCAGCTGAGTTCTGCGATACAGAAGAAGCCGCCACTGAAG
AGAGAGGATTCATTTCTAAAGAGATTTTCCACTCGACAAATACCAGAGGCCCAGGAAACT
GTTGAAGACACCGGATCTGAAGGTGCGACTGGCGAAAACAGAGCCTCTCATCGACAGAGA
CGCCGCAAAGTACGCGTGCCTCGCACCGTCGTCAATCCCGATGAAAATTTTTACTTCTAC
TGGCTGTGGGTCATTACAATATGTGTCCTTTACAACCTGTGGACGCTGATAGTTCGACAA
AGCTTTCCGGAATTACAGATTCTCTGCCACTACTTCTGGGTGACCTGTGATGCTATCGGC
GATTTGGCCTTCGCACTTGATTTGGTCGTTCAGCTAAGGACAGGATATTTGGAACAAGGA
TTAATGGTTTACGATTCTAAAAAGCTTGTGAAACATTATCTCTCATCTCGTTCATTCCTT
CTGGACATCGGAGCTCTGACACCCCTGGATCTGTTACAACTGAAGATTGGCACCAACCCT
ATAGTCAGGTTCCCCAGGTTCTTAAAGGTGTACCGAGCTATTAGCTGTTACTACATGGTG
GAGTCACGAACTGTTTACCCGAACTTCTGGCGTGTCATCAACCTAATCCACATACTCCTG
ATCCTGGCGCATTGGTTCGGATGCTTCTACTTCTTACTCTCCGAAGCTGAAGGTTTTCAA
GGTGATTGGGCTTACCCATATCGACCAGGTGACTACGCGACGCTCACAAGAAAATATCTG
GGCTCATTATATTGGTCAACACTAACTCTCACTACGATTGGAGATTTGCCGACACCAGAG
ACAAACTCTGAGTATGTGTTCACAATCGTGAGCTACTTGATCGGAGTTTTCATCTTCGCT
ACCATTGTGGGACAAGTTGGCAATGTCATTACAAACAGGAACGCCAATCGACTGGAATTC
GAACGCCTCCTAGATGGCGCTAAAACCTATATGAGACACCACAAGGTCCCTGGTGGCATG
AAGCGACGGGTACTGCGCTGGTACGATTATTCCTGGTCACGAGGAAGGATACAAGGTGGT
GGTGACATCAACACCGCTCTGGGACTATTACCTGACAAATTGAAAACTGAACTGGCCCTG
CATGTCAACCTTAGTGTTCTCAAAAAGGTAACAATATTCCAGGAATGCCAGCCCGAGTTC
TTGCATGACTTGGTGTTGAAGATGAAGGCATATATTTTTACACCGGGAGATTCCATCTGT
CGTAAAGGGGAAGTAGCCAGGGAAATGTTTATAATAGCGGATGGCATATTGGAGGTACTT
TCTGAGACCGGGCGAGTGTTAACCACTATGAAAGCTGGGGATTTCTTCGGGGAAATCGGA
ATCTTGAACCTCGATGGATTGAATAAGCGCACAGCAGATGTTAGGTCTGTGGGATATTCT
GAATTATTTTCGTTGTCACGTGAAGACGTATTGGCGGCTATGAAAGATTATCCTGAAGCA
CAAGACATATTGCAGACGCTAGGCCGAAAAAGATTACAAGAAGCGAGAAATATGTCCAGA
AAGTTCAAAGCCGAGGCTAGTCCGGATAAGGCCGCCGGAGACGACAGCGCTCCGAAGAGA
ATTGTACACAAGCTACGTACGGACGTTAAGGGCATCCGTAATGCGATTAGGAGTCGCTCC
CGTGCAGGCCGACGATCAGGCGAGTCGCTGGAGCTGCGCGCCCACGAACCACGACTTAGA
CGCATGACGCGAGTCCACAGTGATGACTCACAGCAACAAGAACAAGGATCACATGAGAAC
GGTGAAACCACATCTGAAAGCAAAGATGGGGAAAAGGCTACATCTCCAATTGGAGCTGGA
CTACCCCTACTATCTCGCCTCAAACTTCTTAAAGAAAAACAGGATCGTGAAGAAAAAGTT
GCGAATCAAAGGCTTTCCACCTCATCAGTAATAACACCTCCGCCAACGCAGCCCATGCCA
TCGACGAGTTCTGCTCAAGATGAACCTGAGGTTATCGGAGCTGGTCTTCCTCTGATACAA
AGACTTTTACTACTAAAAGCTAAAGAAGATAAAGAAAAGAATCTTTTGACTACTCTTAGC
AATCAGCCCTCTAGCTCAGAGACGATAAGTCCATGTTCACTTAAAAGTCCTCTGAGCCCA
ACGGTAAAAAATATAAGCCCGATTAGAAAGGGATCTGATTCCAACTCTCCTGGAAAATTA
CACAGCCCTACTTCGAAGACTTCTAGGAAAAATTCATCAGGCTCTAGTGATGGAACTTCG
AGACCTAAAGTCAGTTTTAAGGACAGAATATTGCAGGTGCAAGTTCATGGAACACCAGTT
TGTCCACCCCCTAATAAAGTTGCTTTAGAAAGCACGAACATTGTTGCTGAAACAACCCAA
AAATCTGACAGTAATTTAATATCCATACCTCATTCAGTTGTGAGCAAAATAAGATCACCA
GCCAAATCTGTTGGATCAAGCTTACGGGATAAATTTAGATTATTAAAAGTTGGTGGATCT
GACAAAGATTGTGGCACCTTTGCGATAGAAAAAATTAAACCTCAAAATATAACAGCTGAA
GTTTCACATTCAAAAGAGAGTCAGGAAGAATTCAAAAATAAAAAACCTTGGAACAAACTG
AAAAGAGCTGCGATCTCGAGTGAATCAAAAAGTAAATCTATTTTAGATGACAAAATTGAA
ATGGAAACGGAAATAACTGAACCACCTGCAGGAAATCTGGATGAAGGAAACAACGTTACC
ATAGCTATCACCGATACAACAGACCTCGTAAGCGAAGACAGAGCTGATGTTGAAAGTAGC
ATTGTCAGTACAGCAATCGATAAGGCTATAGTCGTGTCAGAAACTTCGAAAGGCGTACTG
GAGAAACCTGTGGGTCTATTACAATTGTTTCCCAAGAACCTAAGCAAAACCACGGATTCA
ATAACCAGCTCTGAGTGCTCACAATTGAGTAAAGATAAAAGATATAGATCCATAGATGAT
TTATCACCGGAATATGGAGGACTCCCTTTCGTTAAAAAGCTAAAAATTTTAAATGAGAGG
CAGAAGTTGGTAGAGTTGGAGAATGTCATCAAATTCAGGAGCTCAAGCTTAGACAACACG
AGTTCTTCAGAAGACTTACTCGGAGATACCCTGACAAGAAGTCATTCCGAAAGCAGCACT
ATGGATAAACGTAAATATAAAAGGAAATCTCTCGATTCAGTCGGAAGTCACGAATCTAAT
GAAACCCTGGAGAGACGTACACTCAAATCAATATTAAAAAAATTATCAGAAGATGTCACA
CCAGCTGAGAGTCCGGAAAGGAGTAACGAACTTAAAAGGTTAATAAGAGCTCCTACAATA
GAAGGTTACGCTGCAAGACACTCCAAATTTGCAAAGAGTGTCACTTTCAACAGACATACA
TTGCCATCCCCACCTTCTAGTGCTTCAGATATGCCCGACGATGTTTTTGAATTACCGACC
CCAATTGAATCTGCGCCATTAAAAGAGCAAATAAAGATCCCGGAAGCTGAACAGCAATTT
ACGGAAGCAGATATCGAACCGGAAGTTAGGAGTGATTACAATTTACAACAAAACATTGAT
CCAACATATGATTATAAATCCCTTCGACCTGGAGATATAAGAGTGCCGTCGCCAAAGAAG
AAACTAACCATAATATCGACGGTAGCCAATCAAAGGAGCCTATGGAAAGGTTCATTAGAA
GAACAGGAATATTATGGAGAGCTTCTGATAGGAATAAAACAAGTAATGCAAATTCATTTG
CAAGAAATCCAAGGAAAATTCCGTGAAAGCTTCTGTAGCCTAGAAAACGAAGTGAGGAAA
CGAGATGAAATCATAAGTCAACTACAGCAACGAATACAGGAATTGGAAAAGCACGGTCTG
TCAGGGAAACTGGCAAGTTCTGAAATAGAGATGGAAGAGGACTTCCAAATGAGAACTCAG
TCAAAGGATCCAAGCTCCGAAAGCGACGACGGCATCGATGAAGGATTCATGCGAGGCGAC
TCTCTAGACACCGTTTTCACGACATCACCGCCAGAAGTAACTTCAGAACCTAAAGCAGTT
AAGAAAGTACGAGAAGAAGAAGAATACGAAGAACATGAAATCGCTGATGAGAGCGTATCA
GACATATTGGAAGGAATAGAACTAAATAAACTATCGTACTCGGATATTCAGAGCTTGGGT
GAATATTTGTCTAATAAATCAAAAGCCAGCCAACGAGAGTTCGCTGTGAGCAAGTCCAAG
AGAATGGATCTGAATTTAGACGGCAAAGCAGGTACATATTCGAGGAAAAGAGCAAAAAAA
CTGAAACAGAGAAAATCTTGGGAGGATCAGAATTACCGGGAATCAATGGAGTTACAGGAT
TTGAGGCCACTATCTCCGCAAGTCACTTCCGAGGACCGATCTCTCCTGAGTCCGGAACAA
TCCAGCCTGAAACGGACCCCTCTCCAGTTTTTCGGATCTCACTTGGACAGCACTAAATCT
AAGATAAAGAAAACCTTATCGGTGGACACCGGCATGCATCACACCGGCGAGAGAAAACGC
TTGCGCCAGCAGCGCAAATTTAGTCTGGGATCTTTGTTCGGAAACCGAGGCAGACGACAG
GATATCGAGCTGAACATAGCCAGTGACACCAGCTGGACCGAAAGTGCATCAACATCCAGC
AGTGACTCGGAATCAATACCACGTACTCCAGTATTTGAAGAGTTTGAAAAGGCTAATGCC
AGGAGAGCCAGAAGTTCGTCTAGCGCAAGCAGTATGCCATTGCTAAGCAAAGACGGCGGA
TCTGATTGGGAAGTAATGATGCTCGTAGAAGAGTTAGCGAAGAGAGAACAAGAAAGAGAT
GACGCCAGAAGACAAGCCTACGCTCTGAGGGACCTGGAAGAGGAATCCGACATGGGACAA
CGCGACAGTCTCGACGACTCCAACACTGAAGACTCGGCCTCACGCAGCCCAACCACAGCT
GACAGCGACCCCGCGCTACATGTCCAACCAGAACCGGCAACTTCGAGGCAGTCCAGGCGC
CTCATTCTCAGAGCATCGAGCTTGGACAGCGACTCTAAAGCTACGTCATCTCAACCAAGG
AAATACGGCTCCCTGAAGAGCTGCAGATCAGACTATCACAAAAGGCTATAA
Protein sequence:
MKLRTTVQLSSAIQKKPPLKREDSFLKRFSTRQIPEAQETVEDTGSEGATGENRASHRQR
RRKVRVPRTVVNPDENFYFYWLWVITICVLYNLWTLIVRQSFPELQILCHYFWVTCDAIG
DLAFALDLVVQLRTGYLEQGLMVYDSKKLVKHYLSSRSFLLDIGALTPLDLLQLKIGTNP
IVRFPRFLKVYRAISCYYMVESRTVYPNFWRVINLIHILLILAHWFGCFYFLLSEAEGFQ
GDWAYPYRPGDYATLTRKYLGSLYWSTLTLTTIGDLPTPETNSEYVFTIVSYLIGVFIFA
TIVGQVGNVITNRNANRLEFERLLDGAKTYMRHHKVPGGMKRRVLRWYDYSWSRGRIQGG
GDINTALGLLPDKLKTELALHVNLSVLKKVTIFQECQPEFLHDLVLKMKAYIFTPGDSIC
RKGEVAREMFIIADGILEVLSETGRVLTTMKAGDFFGEIGILNLDGLNKRTADVRSVGYS
ELFSLSREDVLAAMKDYPEAQDILQTLGRKRLQEARNMSRKFKAEASPDKAAGDDSAPKR
IVHKLRTDVKGIRNAIRSRSRAGRRSGESLELRAHEPRLRRMTRVHSDDSQQQEQGSHEN
GETTSESKDGEKATSPIGAGLPLLSRLKLLKEKQDREEKVANQRLSTSSVITPPPTQPMP
STSSAQDEPEVIGAGLPLIQRLLLLKAKEDKEKNLLTTLSNQPSSSETISPCSLKSPLSP
TVKNISPIRKGSDSNSPGKLHSPTSKTSRKNSSGSSDGTSRPKVSFKDRILQVQVHGTPV
CPPPNKVALESTNIVAETTQKSDSNLISIPHSVVSKIRSPAKSVGSSLRDKFRLLKVGGS
DKDCGTFAIEKIKPQNITAEVSHSKESQEEFKNKKPWNKLKRAAISSESKSKSILDDKIE
METEITEPPAGNLDEGNNVTIAITDTTDLVSEDRADVESSIVSTAIDKAIVVSETSKGVL
EKPVGLLQLFPKNLSKTTDSITSSECSQLSKDKRYRSIDDLSPEYGGLPFVKKLKILNER
QKLVELENVIKFRSSSLDNTSSSEDLLGDTLTRSHSESSTMDKRKYKRKSLDSVGSHESN
ETLERRTLKSILKKLSEDVTPAESPERSNELKRLIRAPTIEGYAARHSKFAKSVTFNRHT
LPSPPSSASDMPDDVFELPTPIESAPLKEQIKIPEAEQQFTEADIEPEVRSDYNLQQNID
PTYDYKSLRPGDIRVPSPKKKLTIISTVANQRSLWKGSLEEQEYYGELLIGIKQVMQIHL
QEIQGKFRESFCSLENEVRKRDEIISQLQQRIQELEKHGLSGKLASSEIEMEEDFQMRTQ
SKDPSSESDDGIDEGFMRGDSLDTVFTTSPPEVTSEPKAVKKVREEEEYEEHEIADESVS
DILEGIELNKLSYSDIQSLGEYLSNKSKASQREFAVSKSKRMDLNLDGKAGTYSRKRAKK
LKQRKSWEDQNYRESMELQDLRPLSPQVTSEDRSLLSPEQSSLKRTPLQFFGSHLDSTKS
KIKKTLSVDTGMHHTGERKRLRQQRKFSLGSLFGNRGRRQDIELNIASDTSWTESASTSS
SDSESIPRTPVFEEFEKANARRARSSSSASSMPLLSKDGGSDWEVMMLVEELAKREQERD
DARRQAYALRDLEEESDMGQRDSLDDSNTEDSASRSPTTADSDPALHVQPEPATSRQSRR
LILRASSLDSDSKATSSQPRKYGSLKSCRSDYHKRL