New model in OGS2.0 | DPOGS212747  |
---|---|
Genomic Position | scaffold3:+ 107328-109757 |
See gene structure | |
CDS Length | 1170 |
Paired RNAseq reads   | 893 |
Single RNAseq reads   | 2203 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA013166 (0.0) |
Best Drosophila hit   | histone deacetylase 3 (3e-168) |
Best Human hit | histone deacetylase 3 (2e-148) |
Best NR hit (blastp)   | histone deacetylase 3 [Culex quinquefasciatus] (0.0) |
Best NR hit (blastx)   | PREDICTED: similar to histone deacetylase [Tribolium castaneum] (0.0) |
GeneOntology terms    | GO:0004407 histone deacetylase activity GO:0016575 histone deacetylation GO:0045449 regulation of transcription GO:0005634 nucleus GO:0005737 cytoplasm GO:0006342 chromatin silencing GO:0043066 negative regulation of apoptosis |
InterPro families    | IPR000286 Histone deacetylase superfamily IPR003084 Histone deacetylase |
Orthology group | MCL14462 |
Nucleotide sequence:
ATGCAAGTGTATAGGCCATATCGAGCGAGTGCTCATGATATGTGCCGTTTCCACAGCGAG
GATTACATAGAATTCCTTCAGAATGTCACTCCGCAGAATATTCAAACATATTCCAAGGAT
CTACTGCACTACAATGTCGGTGATGACTGTCCAGTATTTGAGGGCCTCTTCGATTTCTGT
TCAATGTACACGGGAGCATCTCTCGAAGGTGCCATGAAATTAAACAACAACGCCTGTGAT
ATAGCCATCAACTGGTCGGGCGGTTTGCACCATGCTAAGAAATTTGAACCGTCTGGTTTC
TGCTATGTCAATGATATTGTGATTGCTGTACTGGAACTGCTGAAGTATCATCCGAGGGTT
CTGTACATTGATATAGATGTACATCACGGGGATGGGGTCCAGGAGGCTTTCTATCTGACC
GACAGGGTCATGACAGTTAGTTTCCATAAATATGGCAACTATTTCTTCCCCGGAACCGGT
GATATGTATGAAATCGGAGCTGAGAGTGGGAGATACTTTTCGGTTAATGTACCACTGAAG
GAGGGTATAGACGATCAGAGCTATGTGCAGATATTTAAGCCAGTTATTTCCAATGTGATG
GAGTTTTACCGACCAACTGCCATAGTTCTCCAGTGTGGTGCTGATTCCTTAGCTGGTGAT
AGGCTCGGCTGTTTCTCACTATCCACGCGGGGTCATGGTGAATGTGTGAAGTTCGTCAAG
AACTTGAATGTGCCCACTCTAGTCGTGGGCGGTGGTGGATACACCCTGCGTAACGTAGCC
AGATGTTGGACGTACGAAACGTCACTGCTGGTCGACGAAAATATATCAAACGAGCTGCCG
TACACCGAATATTTAGAGTTCTTTGCACCAGATTTTCAATTGCATCCAGAGATTAACAGT
ACATCGAATGCAAACAGCAAGCAGTATTTGGAAGCAATAACAAAACATGTCTATGACAAT
CTGAAGATGTGTCAACACTCCCCCGCAGTTCAAATGACGCATATACCAGGTGATTTCCTG
CCAGAAGAATACAGGATAAAGGAGGAGCCAGATCCCGACATCCGAATCAGTCAAGAGGAA
GCGGACAAGATGGTGGAACCAAAGAATGAATTCTTTGACGATGACAAAGATAACGACAAA
GAATCTCTGCCGGAGGTCAAGGAACCCTAA
Protein sequence:
MQVYRPYRASAHDMCRFHSEDYIEFLQNVTPQNIQTYSKDLLHYNVGDDCPVFEGLFDFC
SMYTGASLEGAMKLNNNACDIAINWSGGLHHAKKFEPSGFCYVNDIVIAVLELLKYHPRV
LYIDIDVHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMYEIGAESGRYFSVNVPLK
EGIDDQSYVQIFKPVISNVMEFYRPTAIVLQCGADSLAGDRLGCFSLSTRGHGECVKFVK
NLNVPTLVVGGGGYTLRNVARCWTYETSLLVDENISNELPYTEYLEFFAPDFQLHPEINS
TSNANSKQYLEAITKHVYDNLKMCQHSPAVQMTHIPGDFLPEEYRIKEEPDPDIRISQEE
ADKMVEPKNEFFDDDKDNDKESLPEVKEP