New model in OGS2.0 | DPOGS212759  |
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Genomic Position | scaffold3:+ 412761-413966 |
See gene structure | |
CDS Length | 549 |
Paired RNAseq reads   | 1004 |
Single RNAseq reads   | 4199 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA013163 (1e-58) |
Best Drosophila hit   | cuticular protein 57A, isoform A (8e-31) |
Best Human hit | ND |
Best NR hit (blastp)   | cuticular protein RR-1 motif 56 [Bombyx mori] (2e-72) |
Best NR hit (blastx)   | cuticular protein RR-1 motif 56 [Bombyx mori] (4e-64) |
GeneOntology terms   | GO:0005214 structural constituent of chitin-based cuticle |
InterPro families   | IPR000618 Insect cuticle protein |
Orthology group | MCL16463 |
Nucleotide sequence:
ATGCTGGTACAAGTGCTGTTGTTCATAACGAGCGTGGCGCTCACCAGTTGCGATGTCTCC
CATCTGGAAACCACCACGGAGTTGTTGCCCCCTCGGCCTTATGCGTTTTCATACACAGCT
GGTCGGTATCCAGGGGATATTGACAGACAACACGCTGAGGTCAGCGATGGCAGTGGAGTA
GTTAAGGGAACTTTCTCATACGTGGACCCTCGTCACAAAGTTCGCACGGTGGACTACGTT
GCTGACAAAGATGGTTTCCATCCGGTCCTGAGCGATGTTCCGCCAGAACATCCAACTGAC
TCTGAGGCCGTCGCCAGGGCCAAGGACCGCCACTTCCAGCTCTATGCTAAGATAGCCGAA
GATCATGCGCAACATCCCTTCCCTGATGAGACATCGATTCCACGGCAATCAGCTGCTGTG
GCTGCGGCAGCGGCGAAGCACGCCCAGCTGTTCCGAGTAATAGCTGAACAGCACGCACGG
ATAGCAGCAGAAAGAGAGGCCTTGCAGCAGGAGGAAGAAGAGAAACTCGCGCTGCAAGAG
CTGCACTGA
Protein sequence:
MLVQVLLFITSVALTSCDVSHLETTTELLPPRPYAFSYTAGRYPGDIDRQHAEVSDGSGV
VKGTFSYVDPRHKVRTVDYVADKDGFHPVLSDVPPEHPTDSEAVARAKDRHFQLYAKIAE
DHAQHPFPDETSIPRQSAAVAAAAAKHAQLFRVIAEQHARIAAEREALQQEEEEKLALQE
LH