| New model in OGS2.0 | DPOGS212765 |
|---|---|
| Genomic Position | scaffold3:+ 474506-477244 |
| See gene structure | |
| CDS Length | 675 |
| Paired RNAseq reads | 463 |
| Single RNAseq reads | 1122 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013136 (6e-93) |
| Best Drosophila hit | Gos28 (8e-52) |
| Best Human hit | Golgi SNAP receptor complex member 1 isoform 2 (9e-46) |
| Best NR hit (blastp) | PREDICTED: similar to Probable 28 kDa Golgi SNARE protein (Golgi SNAP receptor complex member 1) isoform 1 [Apis mellifera] (1e-68) |
| Best NR hit (blastx) | PREDICTED: similar to Probable 28 kDa Golgi SNARE protein (Golgi SNAP receptor complex member 1) isoform 1 [Apis mellifera] (9e-56) |
| GeneOntology terms | GO:0005484 SNAP receptor activity GO:0016192 vesicle-mediated transport GO:0006891 intra-Golgi vesicle-mediated transport GO:0000138 Golgi trans cisterna GO:0006888 ER to Golgi vesicle-mediated transport GO:0016020 membrane GO:0006886 intracellular protein transport |
| InterPro families | IPR023601 Golgi SNAP receptor complex, subunit 1 |
| Orthology group | MCL14459 |
Nucleotide sequence:
ATGGTTGGATCTTCGTGGGAAGATGTTAGAAAACAAGCTCGCATTCTAGAAAATGACATA
GATGTGAAACTAGTAGCGTTCAGTAAGCTGGGAGTTACCACTGGAGCTGGTTTGAACTCG
GAGAGTATGCCACTGATCAACAGCGAGGACATGTTTGACACCATGTCTATGGAACTGCAG
CAATTGTTAAGTAAGCTGTCACAATTAAACGACAAAATGGCTGAAATTGCACCAAGCGGG
ACAGCGACAATGCACACCATTAAGAGGCACAGGGAAATTCTTATGGATTATCAGCAAGAG
TTTGATCGTACCTCCGCACGTGTTTGTGCTCGTCGCGAAAGAGAGGAATTGCTCGGAGGA
GGGATGGGGGGAGGCGTCCCGTCTGTAGGGCTCAGCAGAAGAGACCAGTATGGAAAGGAA
GCAGCTCATTTGCACAGTTCCCATATCCTGGTCGATGAACAAATAAACATAGCGATGGAA
GCCCGTGAACACCTCACATCACAGAGACAGACTTTCAAGAGGATGCAGACCCGTTTTAAC
GACATTGCTAACAGGTTTCCGATGCTGAACAGTTTGATCTACAGGATAAATGCTCGCAAA
CGACGTGATTCTCTCATAGTCGGTGTGGTTGTGGCTGTGTGCACCTTCCTCCTGCTGCTA
TACGCATTCCATTAG
Protein sequence:
MVGSSWEDVRKQARILENDIDVKLVAFSKLGVTTGAGLNSESMPLINSEDMFDTMSMELQ
QLLSKLSQLNDKMAEIAPSGTATMHTIKRHREILMDYQQEFDRTSARVCARREREELLGG
GMGGGVPSVGLSRRDQYGKEAAHLHSSHILVDEQINIAMEAREHLTSQRQTFKRMQTRFN
DIANRFPMLNSLIYRINARKRRDSLIVGVVVAVCTFLLLLYAFH