DPGLEAN08680 in OGS1.0

New model in OGS2.0DPOGS212770 
Genomic Positionscaffold3:+ 530116-531715
See gene structure
CDS Length1224
Paired RNAseq reads  567
Single RNAseq reads  1661
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA013140 (0.0)
Best Drosophila hit  Arc42 (9e-164)
Best Human hitshort-chain specific acyl-CoA dehydrogenase, mitochondrial precursor (8e-153)
Best NR hit (blastp)  Arc42 [Drosophila willistoni] (0.0)
Best NR hit (blastx)  Arc42 [Drosophila willistoni] (8e-171)
GeneOntology terms





  
GO:0003995 acyl-CoA dehydrogenase activity
GO:0016455 RNA polymerase II transcription mediator activity
GO:0006367 transcription initiation from RNA polymerase II promoter
GO:0016592 mediator complex
GO:0050660 FAD binding
GO:0055114 oxidation reduction
GO:0048813 dendrite morphogenesis
InterPro families





  
IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal
IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain
IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal
IPR009100 Acyl-CoA dehydrogenase/oxidase
IPR006089 Acyl-CoA dehydrogenase, conserved site
IPR006090 Acyl-CoA oxidase/dehydrogenase, type 1
IPR006092 Acyl-CoA dehydrogenase, N-terminal
Orthology groupMCL13012

Nucleotide sequence:

ATGTTAAGATTAATAAGCAGAGCCGTAAACGTGTCCGTGCAATCTTCATCGAGTAGTTCC
AGATGTATAGCTTCACTATCAGCTCTACCTGATACATATCAAATGTTATATAAAACCTGT
AGGGATTTCGCTGAGCAAGAACTGAAACCAAATGCAGCGAAATACGACAGAGAACACCTG
TACCCCGCAGCTGCTATAAAAGAAATGGGTAACTTGGGCCTCATGGCCATAGCGACGCCA
GAAGAATTGGGTGGAACAGGGCTGGACTACTTGGCATATGCCATAGCCTTAGAAGAGATC
TCAAGGGGATGTGCATCTGCTGGAGTAATTATGTCAGTGAATAACTCACTTTACCTGGGC
CCTATCTTGCACTGGGGCACCGATAAACAAAAAGCTGACTTTGTAACCCCATTCTGTTCA
GGGGATACAGTTGGATGTTTTGCCCTGTCTGAACCTGGTAATGGATCAGATGCTGGGGCT
GCATCAACCATAGCAAAAGATGCAGGTGACAAGTGGCTCATCAATGGCACAAAATGTTGG
ATCACAAATGGCTATGAAAGCAAAGCAGCCGTAGTATTCGCTACTACCGACAAAAACTTG
AAACACAAGGGTATTTCAGCATTCATTGTGCCAAAACCAATTAAAGGTTTTGAACTTGGT
AAAAAGGAAGATAAGTTGGGTATCAGAGGTTCGTCGACATGCTCACTGATGTTTGAGGAT
TGCGAAATTCCTAAAGAGAATATCCTGGGAGAGCCAGGATTTGGTTTTAAGATTGCCATG
ATGACGTTGGATGCTGGTAGGATTGGTATTGCCTCACAGGCTTTAGGCATCGCACAGGCA
TCCTTAGATGTAGCGGTGGAGTATGCGTCAAAACGAATTGCATTCGGCAAACCCATAATG
AAGCTTCAGGCTATCCAAAACAAACTTGCCGACATGGCATTACAGCTTGAATCGGCCAGG
TTATTGACATGGAGGGCGGCATGGCTCAAAGACAATAAAAAGCCATACACTAAGGAAGCT
GCCATGGCTAAGTTGGCTGCCTCCGAAGCAGCTACATTTGTATCTCATCAATGCATACAG
ATTCTGGGTGGTATGGGCTATGTGTCGGATATGCCAGCGGAGAGGCATTACAGGGATGCT
AGGATCACTGAGATCTACGAGGGCACATCGGAAATACAACGACTGGTTATAGCCGGACAG
ATCATTAAGGAATACGGTGTTTAA

Protein sequence:

MLRLISRAVNVSVQSSSSSSRCIASLSALPDTYQMLYKTCRDFAEQELKPNAAKYDREHL
YPAAAIKEMGNLGLMAIATPEELGGTGLDYLAYAIALEEISRGCASAGVIMSVNNSLYLG
PILHWGTDKQKADFVTPFCSGDTVGCFALSEPGNGSDAGAASTIAKDAGDKWLINGTKCW
ITNGYESKAAVVFATTDKNLKHKGISAFIVPKPIKGFELGKKEDKLGIRGSSTCSLMFED
CEIPKENILGEPGFGFKIAMMTLDAGRIGIASQALGIAQASLDVAVEYASKRIAFGKPIM
KLQAIQNKLADMALQLESARLLTWRAAWLKDNKKPYTKEAAMAKLAASEAATFVSHQCIQ
ILGGMGYVSDMPAERHYRDARITEIYEGTSEIQRLVIAGQIIKEYGV