New model in OGS2.0 | DPOGS208480  |
---|---|
Genomic Position | scaffold672:- 1123-2414 |
See gene structure | |
CDS Length | 888 |
Paired RNAseq reads   | 21 |
Single RNAseq reads   | 51 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA010624 (6e-73) |
Best Drosophila hit   | CG3769 (5e-21) |
Best Human hit | cytoplasmic dynein 2 light intermediate chain 1 isoform 1 (5e-26) |
Best NR hit (blastp)   | AGAP010165-PA [Anopheles gambiae str. PEST] (7e-36) |
Best NR hit (blastx)   | conserved hypothetical protein [Pediculus humanus corporis] (1e-34) |
GeneOntology terms    | GO:0031513 nonmotile primary cilium GO:0042073 intraflagellar transport GO:0030286 dynein complex GO:0003774 motor activity GO:0005874 microtubule GO:0042995 cell projection GO:0005737 cytoplasm GO:0005929 cilium GO:0030030 cell projection organization GO:0005856 cytoskeleton GO:0007275 multicellular organismal development |
InterPro families   | IPR013684 Mitochondrial Rho-like |
Orthology group | MCL15561 |
Nucleotide sequence:
ATGTCTATACCAGATTTAGCTGTGGAAATAGTTAACAAAACTTTAAAAGATGCGAACGAA
GATACTGCACGCACTATAGTTTTGGTTGGTAGTAAGTCTGCAGGCAAGTCACATCTATTG
TACAGTTTTCTGGAAAAATCTGAGACTCCACGAGAGACTTTAGTATTGGAATATTCTTTT
GGCAGAAAATCATCTCAAAAGCCTGGCATGGATAAGACAATTTGTCACGTTTGGGAATAC
GGTGGTAAATTAGAGATGTTGCACAGTGTCCTAATATCAGTTCCTATTAAAGGAAAGTTC
TATTTCTGCATTATGGTGGACTTGAGCAAGATTAAAACCATATGGAATGTGCTAGAAACA
TGTTATCAAGCAATGAAAGAAAACTATTCTGATTCAGATTATCATCCCGAGTTAGTAATA
ATCGGAGGAAAATATGATATTTTCAAAAATTATGACAGTGAAATTAAGAAGGTAATTAGT
ACGACAATGAGGAGTTTTGCACTCATATCCAACGGAAATTTGTTGTTCTATTCTTCAAAG
GAACCGCAATTGGTACGACGAGCTAAAGAGATGTTCTTTAACATGGGATTTGGAAATGGA
GTTTCATTGAAAGAAAAGAATACAAATTATTCTAAGCCTTTAAGCATCTCTAAGGGCCAA
GACACTTGGGAAAATATAGGAATTCCTCAGTCTACACTGGACCAAATAAAACAGCGTCAC
ATATCCCGTATTACTCCCGAAATGGATATAAATCAGGAAGTTAAGCCGTTACAACGCAGC
CATCCAGAACCTATCCTGGACTCGCTCGCGACTCTAAAATACGACGAGCTCCGTAATATG
GAGCATTTTGATCCAGCTCTAAACGAATATTTAATGTTAATTAATTAA
Protein sequence:
MSIPDLAVEIVNKTLKDANEDTARTIVLVGSKSAGKSHLLYSFLEKSETPRETLVLEYSF
GRKSSQKPGMDKTICHVWEYGGKLEMLHSVLISVPIKGKFYFCIMVDLSKIKTIWNVLET
CYQAMKENYSDSDYHPELVIIGGKYDIFKNYDSEIKKVISTTMRSFALISNGNLLFYSSK
EPQLVRRAKEMFFNMGFGNGVSLKEKNTNYSKPLSISKGQDTWENIGIPQSTLDQIKQRH
ISRITPEMDINQEVKPLQRSHPEPILDSLATLKYDELRNMEHFDPALNEYLMLIN