| New model in OGS2.0 | DPOGS203282 |
|---|---|
| Genomic Position | scaffold6:- 1562929-1569379 |
| See gene structure | |
| CDS Length | 1905 |
| Paired RNAseq reads | 345 |
| Single RNAseq reads | 850 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012226 (0.0) |
| Best Drosophila hit | succinyl coenzyme A synthetase flavoprotein subunit, isoform C (0.0) |
| Best Human hit | succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial precursor (0.0) |
| Best NR hit (blastp) | GH22974 [Drosophila grimshawi] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to AGAP010429-PA [Acyrthosiphon pisum] (0.0) |
| GeneOntology terms | GO:0008177 succinate dehydrogenase (ubiquinone) activity GO:0005749 mitochondrial respiratory chain complex II GO:0004776 succinate-CoA ligase (GDP-forming) activity GO:0006099 tricarboxylic acid cycle GO:0009055 electron carrier activity GO:0050660 FAD binding GO:0022900 electron transport chain |
| InterPro families | IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site IPR011281 Succinate dehydrogenase, flavoprotein subunit IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit IPR003953 Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal IPR004112 Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal |
| Orthology group | MCL10405 |
Nucleotide sequence:
ATGCTTTTGGCCTCTCTTAAAGGCGGACTTAAAAGAAGTCACAAAGGCCTTATCAATGTG
CCCAAGCGGACCAAAGCGTATACCATAAAATACCATAAGCATGATTGCCTGGTTCTTGGG
GCTGGAGGCGCTGGGCTTAGAAGCGCTATAGGACTTGGAGACGCAAAGTTTTCAGTGGCA
GTGGTTAGCAAACTGTTCCCCACGCGATCACATACTATCGCTGCCCAAGGCGGCATGAAC
GCATCTATCGGAAGTATGCACGCGGATGACTGGCGTTGGCATTTCTATGATACCGTTAAA
GGTTCGGATTGGCTTGGGGATCAGGATTCAATTCATTATCTAACTCGTAACGCACCCCAC
TGTGTGTTTGAGTTAGAAAACATGGGGATGCCATTCTCAAGAACGAAAGAGGGAAAGATA
TATCAGAGATCGTTTGGCGGTGGTACTATTGAGAGGGGGAAAAAAATTGCAAAAAGAACT
TGTGCTGTTGCCGATCGAACTGGTCATGCGCTATTGCACACCTTATATGGCTATAGCACC
AAGTTTAAAAACGTTGATTTCTTCACTGAATTCTTCGTACTTGATATTCTCATGCAAGAC
GGCGCATGCGTTGGAGCTTTGGCTTTGGACATGGATGATAGCAGTCTTCATTGTTTCCAA
GCTATGAATACAGTAGTTTGCACGGGCGGATACCCTCGGATGTACTTTTCTTGTACTGCT
GCCCACACCTGCACAGGGGACGGCTGTGCTATGGCTGGGAGAGCTGGCTTTCCTCTGCAA
GATTTAGAGTTTATACAATTCCACCCCACCGGAATGTATGGATCTGGTTGTCTTATGACG
GAGGGTTGCCGAGGTGAAGGTGGGTACATTGTTAATAGCGAAGGAGTAAGATTCATGGAA
AAATATGCACCTAAAGCCAAGGATCTTGCGAGCAGAGACGTCGTTTCAAGATCAATTGCA
ACAGAAATAAAAGAAGGCAGAGGGGTGGGCCCGAAGAAAGATCATGTTTACCTTCAGCTT
CACCATCTCCCTGCAGAGACGATAAGAGAAAAGCTGCCTGGTATTTCGGAAACCGCGTAT
ACTTTCACCGGCGCAGATGTTTACACGCAACCCGTACCGATTGTGCCAACAGTACATTAC
ACTATGGGAGGTATACCGATAAATTACAAGGGAGAGGCTTTAGTCTACCAAAATGGGAAG
GATAACGTAATACCCGGCTTACATGCTGCTGGTGAGGCAGTTAGTAATTGCCACGGAGCC
AATAGATTGGGCGCAAACTCGATTCTTGACGTCGTCGTATTTGGAAGATCTATTGGTTTA
AACTTAGCAAAGATTGCTAAACCCGGAGCCAATCAACCTAAATTAAAAGACGGTATATGT
GATGCGATTCTAGATAATTATGAAACTGTTAAAGGCAGTAATGGATGCGTAGCGGTACAT
GAACTTAGAGAATCAATGAGACACACGATGCAGAACAAGTGTGGCGTGTTCAGAGATAGT
AAGCTGTTAGGCGAAGCCAATGAAGAAATACAAAAATGTTTTAAGCTCTTCAAAGAGATT
AGAGTTACGGATCAAAGGCGAAACTGGAATTCAGATCTCATCGAAGCGTTGGAGTTACAA
AACATGGTACAAACTGCTGTCCAAGTCGTAGCTTGCGCTCTTAATCGTAAAGAAAGTCGC
GGAGCTCATTTTCGAGATGATTTTCCTAAGCGGCTCGACGAAATGGATTACAGCAAAGAC
ACTAAAGGACAAACCCCGAAGCCAATAGATCAGCATTGGAGAAAACATAGCTTGTCTAAA
GTTGATTTGGATACTGGCAAGGTCACGATCACCTACCGGCCGGTCATTGACAAGACTATG
AGTGATGAAGTTGAAACAATACCGCCGGTACCGAGAGTTTATTGA
Protein sequence:
MLLASLKGGLKRSHKGLINVPKRTKAYTIKYHKHDCLVLGAGGAGLRSAIGLGDAKFSVA
VVSKLFPTRSHTIAAQGGMNASIGSMHADDWRWHFYDTVKGSDWLGDQDSIHYLTRNAPH
CVFELENMGMPFSRTKEGKIYQRSFGGGTIERGKKIAKRTCAVADRTGHALLHTLYGYST
KFKNVDFFTEFFVLDILMQDGACVGALALDMDDSSLHCFQAMNTVVCTGGYPRMYFSCTA
AHTCTGDGCAMAGRAGFPLQDLEFIQFHPTGMYGSGCLMTEGCRGEGGYIVNSEGVRFME
KYAPKAKDLASRDVVSRSIATEIKEGRGVGPKKDHVYLQLHHLPAETIREKLPGISETAY
TFTGADVYTQPVPIVPTVHYTMGGIPINYKGEALVYQNGKDNVIPGLHAAGEAVSNCHGA
NRLGANSILDVVVFGRSIGLNLAKIAKPGANQPKLKDGICDAILDNYETVKGSNGCVAVH
ELRESMRHTMQNKCGVFRDSKLLGEANEEIQKCFKLFKEIRVTDQRRNWNSDLIEALELQ
NMVQTAVQVVACALNRKESRGAHFRDDFPKRLDEMDYSKDTKGQTPKPIDQHWRKHSLSK
VDLDTGKVTITYRPVIDKTMSDEVETIPPVPRVY