| New model in OGS2.0 | DPOGS203301 |
|---|---|
| Genomic Position | scaffold6:- 992981-1018437 |
| See gene structure | |
| CDS Length | 3417 |
| Paired RNAseq reads | 3507 |
| Single RNAseq reads | 9095 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012255 (9e-177) |
| Best Drosophila hit | trio, isoform C (5e-75) |
| Best Human hit | triple functional domain protein (7e-68) |
| Best NR hit (blastp) | PREDICTED: similar to AGAP006107-PB [Tribolium castaneum] (9e-114) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC003063 [Tribolium castaneum] (5e-84) |
| GeneOntology terms | GO:0005089 Rho guanyl-nucleotide exchange factor activity GO:0007422 peripheral nervous system development GO:0007411 axon guidance GO:0007417 central nervous system development GO:0030036 actin cytoskeleton organization GO:0005886 plasma membrane GO:0007266 Rho protein signal transduction GO:0005622 intracellular GO:0035023 regulation of Rho protein signal transduction GO:0050770 regulation of axonogenesis GO:0016319 mushroom body development GO:0048676 axon extension involved in development |
| InterPro families | IPR001452 Src homology-3 domain IPR001849 Pleckstrin homology domain IPR000219 Dbl homology (DH) domain IPR000719 Protein kinase, catalytic domain IPR007110 Immunoglobulin-like IPR011993 Pleckstrin homology-type IPR013783 Immunoglobulin-like fold IPR011009 Protein kinase-like domain IPR017441 Protein kinase, ATP binding site IPR003599 Immunoglobulin subtype IPR002290 Serine/threonine-protein kinase domain IPR020635 Tyrosine-protein kinase, catalytic domain IPR017442 Serine/threonine-protein kinase-like domain IPR013098 Immunoglobulin I-set |
| Orthology group | MCL18025 |
Nucleotide sequence:
ATGAGCTGGGTGGTCGCCGACCACTCGTCGGGAGGAGCTGGGGAGGTGTCGGTATGTAAA
GGACAGCAGGTGGAGGTGCTGGAGGCGTGGGCGGCGCGCCCCGATTGGTGGCTGGTGCGC
CGGGCGGGCGAGCCTCCAGTTGAAGGAGCTGTACCCGCCGCGGTGCTGAAGCCTCAGCCG
CACCAGAAGACGTCACCGTCAAGGCGACCACTCAGCCAGCCTGATGATAACATAGGTAAG
CGTTGGATTCCCCGGCCGAGCAAGTCCCAGGGCAAGGGTGAGAAGACAAGCGGCAACGCC
AAGTCACCAGCCGCCACCGACAAGCCTTCATTGAAGAAGGTGCCCTCGGAGAAGAAGATT
AAGTTCCCGTACGCTGAGACCGCACGAACAGAGGACGGCGAGGGGCTGGTGACGGCGCTG
GATGATCAGGAAGACGACGCGCCCGACGTCGAGCTACCACCGCCCATGAAGCCCATACAG
GATCCCCAGGCTGTGTTGCAACAGGCTCCCATCCCAGCCGCCACGACCGCGGCACCCGTC
GCCAGGGAGCAGCATGGCGGGGGAGCTTCCCGAGCTCCGGACGAGGAGGAGGAGGCCGCT
GACTCAGAGAGCGCCGCAGCCTCGCTCAAGAAGAGGGAGTACGTCCTCAAGGAACTGTAC
GAGACCGAGGAGATATATGTCAGTGATCTGAAACTCGTCTGCGAAGGATACATGAAGCAC
ATGATGGACCCGCACGCGGAGCCGCCCGTCCCCGACGGTCTCAGAGACCGACGGCTGCTC
ATGATCTTTGGAAACATTGAAGCCATCTACGAATGGCATCGCGATAAGTTCCTGCGCGAG
TTGGAGGGCTGTCTGGTGGCGCCTGAGCTGCTCGGACCTCTGTTCAGACGGTTCCTGGAG
AAGAAAATCGTCCTCTACGAAACATACTGCCGGAACAAGCCCGTCTCAGAGTTTATAGTG
TCCAAGCACGAGAGCTACATTCAAGATCTGAGACACAAACTCGGACATAAGTTGCAGCTC
GGTGATCTCCTTATCAAGCCGATCCAGCGCATCCAGAAGTATCATCTGCTGGTGAAGAAA
GTTCTTTCGTATTCCGAGCTAGCCGGAGCCCCGGCGGCCGTGCTGGCCTCACTGAGGGAC
GCCGTACACTGCACCTCCATAATACCTAAGACAGCCAACGACATGATGGACGTAGGAAGA
CTGAAGGGCTTCACGGGGAACATAGCGGCGCAGGGTAAGCTGTTGTTCCAGGAGCCGCTG
GTTGTAGCAGACAGGAACTGTTCCAACGACAAAGGCAAGGAACTGCACGTGTTCCTGTTC
GAGCAATGCGTCATATTCACAGAGGCCGTCGGCAAGAAGACACAGTTCTCAGGACCCACC
TACAACTATAAAGCTCACGTTAAGGTGAACAAGATGGCGCTAGAGGAGGTGGACGGTAGC
AACACGTTCATAATTCACTCCAACGGTCTGGAGTACAAGCACCAGCCGCAGTCGTTCGTG
TGTAGGGCGCCCGAGTCTCGCAGGCAGCACTGGGTGTCCACACTCTCCACCATACTACAA
TCTCAGCTGATCTTCGGCGAGCGCCTCGAGAACCCTGGCGCCTTCCTTCAGAGGGACGCC
AATAACGCGGGCGAGGGTTGGTGCGGGCTACGGAAGACTGAGAGCGTACCGCCGTCTGTG
GGCGGGCGACTGGCGCCGGAGCTGCGCGGGCGCACACAGCGACCGCACGCCAAAGCCAAC
ACCATCAACCTACCATCCAGTGCGAGAGACGACCACAAGAAGGTGGCGCCACCGCTCACG
CCCACATCACCACACCATAACGGTTTGTCGAAGCGCGCTTGGGGGTTGAAGTTGCGTCGC
GGCGGCAGCACGCCGTCATCGCCGTCCGCGGCCGAGCCTAATGACGGCGTGGTCACGGAG
CTGCGAGCCCCCGAGCTGTCCGAGCCCGCCGCTGACGTCACAGTGGCCGCCGGAGCCTCC
GCCACACTCTCGTGTCGCGGTCTGGCCACAAGAGCCACAGCCTCGTGGCGTAAAACGGCG
CCGGAAACTCTGGCTCTACGACACGGAGGTCGTTTCGCAATCAGCTTCGGATCCGACGGC
CTCGCCACTCTCACTATACACGCCTGCCGCGCCTCGGATGCTGGCGTCTACTGTTGTCTC
ATAAGCAACGAACTCGGCGGTGTACAGTGTTCGGCTCGACTGACGGTGGCTGCAGGCGGG
CTGCCTGGAGTTCCCGTGGTTAGAGCTCACCCCGGCGGTGGACTTGTGGTCCAGTGGGAT
GAATCGGAGGCTGTGCATCTTGAATACTGCCGTGTCGGCGAGGGCGAATGGCGTCGAGCT
ACCGAAACGCCCGCTACAGCAAATACGCTAGCACTAGAGGAATTACCTGCTGGTCAATAC
AGTTTTCGTGTAGTGAGTGCCCGTAGCGGCGCCGCGGGTTCCGCGTCCGGTCCAGCGACT
TGCGGTGGTGGTGGGAGTTGGCAACGAGAACAATTCGCACGGAGATACACTTTGGAAGAG
GAGATAGGACGCGGTCGGTCGGCGCGAGTCCTGTCCGCTCGTGACACCGGCACCGGCCAA
CGAGTAGCTTTAAAACAGGTGGTGAGCGGTCGAGGCGCGGATGCAGTACGTGAATATCGT
ATATTATCTGGTGGTGCTCACGGCGCTGTGGTCCGTGCCCTGGCACTGTTCGCCGAGGTG
CCCCGGGCGGGCGCACACACGCTGGTGTTAGAGCTAGTTGGAGGCGGGCCACTGCTGGAC
TGGGCGGCCTCCTCCGCAGACTACAACGAAAGAACCGTCGCCACGCACACCAGACAACTG
CTATCCGCACTCGAATGGCTGCACTCCAACAATGTAGCACATCTAGACGTCAGGCCGGAG
AACATTTTAGTAGAGTTGGGCGGTGCTCAGCCCCAGCTGAAGCTTGTGGACTTAGGATCG
GCTGTGGAACTCGAAGGAGGCGCCAGCGGTTCGGCTTCTAACGCGGAAAGTACTACAGTA
CTGCCGCCTGCACCCGCCCAGCTTGAATTTGCACCGCCGGAGTGCGTTCTGGGACGACCA
CCAGCACCAGCCTGGGACGCTTGGGCTGCTGGCGTATTTCTTTACGTGTTTTTGACCGGC
TTATCGCCATTCTTGGACGAGTCAATAGAGGAGACGACGGCCAATATAATAAAGTGCGAC
TACTGCTTCCCTCCCGAGCACTGGGGCGGCGTGGAGCGAGCTCAGGAACTGATAAGACGT
TTGTTGGAACCGGTGCCCGCGAGACGGCTCTCACCGGCTGAAGCGCTGCGAGACACTTGG
TTCGAACAGGCTGGCGACACTCAGCTATCTTCGACGCAGCTGAAGACGTTCCTGGAGCGA
CGGCGGCCGGCTGGTCTCGGCAACGCTCTACACTCTCTCCGCTCACCCGACACCTGA
Protein sequence:
MSWVVADHSSGGAGEVSVCKGQQVEVLEAWAARPDWWLVRRAGEPPVEGAVPAAVLKPQP
HQKTSPSRRPLSQPDDNIGKRWIPRPSKSQGKGEKTSGNAKSPAATDKPSLKKVPSEKKI
KFPYAETARTEDGEGLVTALDDQEDDAPDVELPPPMKPIQDPQAVLQQAPIPAATTAAPV
AREQHGGGASRAPDEEEEAADSESAAASLKKREYVLKELYETEEIYVSDLKLVCEGYMKH
MMDPHAEPPVPDGLRDRRLLMIFGNIEAIYEWHRDKFLRELEGCLVAPELLGPLFRRFLE
KKIVLYETYCRNKPVSEFIVSKHESYIQDLRHKLGHKLQLGDLLIKPIQRIQKYHLLVKK
VLSYSELAGAPAAVLASLRDAVHCTSIIPKTANDMMDVGRLKGFTGNIAAQGKLLFQEPL
VVADRNCSNDKGKELHVFLFEQCVIFTEAVGKKTQFSGPTYNYKAHVKVNKMALEEVDGS
NTFIIHSNGLEYKHQPQSFVCRAPESRRQHWVSTLSTILQSQLIFGERLENPGAFLQRDA
NNAGEGWCGLRKTESVPPSVGGRLAPELRGRTQRPHAKANTINLPSSARDDHKKVAPPLT
PTSPHHNGLSKRAWGLKLRRGGSTPSSPSAAEPNDGVVTELRAPELSEPAADVTVAAGAS
ATLSCRGLATRATASWRKTAPETLALRHGGRFAISFGSDGLATLTIHACRASDAGVYCCL
ISNELGGVQCSARLTVAAGGLPGVPVVRAHPGGGLVVQWDESEAVHLEYCRVGEGEWRRA
TETPATANTLALEELPAGQYSFRVVSARSGAAGSASGPATCGGGGSWQREQFARRYTLEE
EIGRGRSARVLSARDTGTGQRVALKQVVSGRGADAVREYRILSGGAHGAVVRALALFAEV
PRAGAHTLVLELVGGGPLLDWAASSADYNERTVATHTRQLLSALEWLHSNNVAHLDVRPE
NILVELGGAQPQLKLVDLGSAVELEGGASGSASNAESTTVLPPAPAQLEFAPPECVLGRP
PAPAWDAWAAGVFLYVFLTGLSPFLDESIEETTANIIKCDYCFPPEHWGGVERAQELIRR
LLEPVPARRLSPAEALRDTWFEQAGDTQLSSTQLKTFLERRRPAGLGNALHSLRSPDT