| New model in OGS2.0 | DPOGS203316 |
|---|---|
| Genomic Position | scaffold6:- 792170-794755 |
| See gene structure | |
| CDS Length | 672 |
| Paired RNAseq reads | 263 |
| Single RNAseq reads | 942 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012304 (3e-103) |
| Best Drosophila hit | peroxiredoxin 6005 (1e-70) |
| Best Human hit | peroxiredoxin-6 (2e-72) |
| Best NR hit (blastp) | 1-Cys peroxiredoxin [Bombyx mori] (8e-107) |
| Best NR hit (blastx) | 1-Cys peroxiredoxin [Bombyx mori] (2e-107) |
| GeneOntology terms | GO:0005764 lysosome GO:0005829 cytosol GO:0016491 oxidoreductase activity GO:0016787 hydrolase activity GO:0016023 cytoplasmic membrane-bounded vesicle GO:0051920 peroxiredoxin activity GO:0045454 cell redox homeostasis GO:0000302 response to reactive oxygen species GO:0005737 cytoplasm GO:0004601 peroxidase activity GO:0016042 lipid catabolic process GO:0055114 oxidation reduction |
| InterPro families | IPR017936 Thioredoxin-like IPR012335 Thioredoxin fold IPR012336 Thioredoxin-like fold IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant IPR019479 Peroxiredoxin, C-terminal |
| Orthology group | MCL14796 |
Nucleotide sequence:
ATGCTGTTTCTTGGTGATGTTTTTCCAAATTTCACAGCAAATACTACTGCAGGTGAAATA
AATTTTCATGAATGGCTTGGTTCCTCTTGGGGTATCCTGTTCTCTCATCCATCTGATTTC
ACACCGGTCTGCACTACTGAACTGGCGAAATTACTTAATCTGCTTCCAGAGTTTGAAAAG
CGGAATGTCAAGGTTATTGGCTTGTCTTGTGATTCGATTTCCTCTCATATAGAGTGGTGC
AAAGATATCAAAAGCTATGCAGGCTGTAACGAAGATGAGAAGTTTCCGTACCCTATAATA
GAGGATCAGGACAGAAGTCTAGCTAAGAGCCTGGGAATGGTTGATAAAGATGAATTAGAC
CAAAAAGGCCTGCCGCTGACTGCCAGGGCTGTATTCATTATAGATGTGAACAAGAAATTC
CGTCTGTCGTTATTGTATCCTGCAACCACAGGAAGAAACTTTGATGAGATTCTCCGCGTG
ATAGATTCGCTGCAGCTCACTGATAAGGCTAAAGTGGCGACGCCGGTCAATTGGAAGATG
GGCGATGACTGCATGGTGTTGCCAACAATACCCCAAGATCAGGTCACCAAGTTTTTCCCA
AGAGGTGTCACTGTGGTGCCCCTGCCTTCGGGCAAAAACTATTTGAGGAAGACGGAATGC
CCCAAATTGTAA
Protein sequence:
MLFLGDVFPNFTANTTAGEINFHEWLGSSWGILFSHPSDFTPVCTTELAKLLNLLPEFEK
RNVKVIGLSCDSISSHIEWCKDIKSYAGCNEDEKFPYPIIEDQDRSLAKSLGMVDKDELD
QKGLPLTARAVFIIDVNKKFRLSLLYPATTGRNFDEILRVIDSLQLTDKAKVATPVNWKM
GDDCMVLPTIPQDQVTKFFPRGVTVVPLPSGKNYLRKTECPKL