New model in OGS2.0 | DPOGS203322  |
---|---|
Genomic Position | scaffold6:- 478127-482218 |
See gene structure | |
CDS Length | 951 |
Paired RNAseq reads   | 610 |
Single RNAseq reads   | 1598 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA004989 (1e-21) |
Best Drosophila hit   | ND |
Best Human hit | zinc finger CCCH domain-containing protein 10 (2e-10) |
Best NR hit (blastp)   | PREDICTED: similar to zinc finger CCCH-type containing 10 [Apis mellifera] (1e-12) |
Best NR hit (blastx)   | PREDICTED: similar to zinc finger CCCH-type containing 10 [Apis mellifera] (9e-12) |
GeneOntology terms    | GO:0003676 nucleic acid binding GO:0008270 zinc ion binding GO:0046872 metal ion binding |
InterPro families   | IPR000571 Zinc finger, CCCH-type |
Orthology group | MCL19913 |
Nucleotide sequence:
ATGCAGGTTACTGAGGCAGATCAATATAGCTCTAAAAGGGTCGGAGTCGCGGAACATTTA
ATCAATTTCAAATCATCGCCGAATTTTAAGAATATGAAAAAATTTATAAGATCAAAAATG
GATCTAATAGAAAAAGCAAGTCATACAGCTCCGGATCCGCCTCCACCTCCAAATGTTGGT
AATACTGTTAGCTCGGAGGTTCAGCCGCCATTGCCCTTAGAGCCACCTCCTCCAGACGAG
ATATATAGCTTGAATGTTAAAAAAGAACTGGATGACTCAAAATTCGAAAATGGCCCCAGT
GAGGAAGTCAGTGAAACACAAAGTAAGGAAGTAGTGAATGAAGTTACTGGCTCACAGCAG
GAACCAACAGAAAAACCTAAAGAAACGATATGCAGAGACTTCATAAGGGGGTCATGTAAA
CGTCCTGGAACTTGTCGATATGCACATAAATTTGATCTGAGCCAATTAGTGGGAGTGTAT
ACATTTTGTCGCAAATACCAAACATCGGTTTGCACGTATCCCATCTGTAAATACGTGCAT
GCGTCTGTATTTGAAGAGCATCACTTCTATAGGACAGGAGTTTTGCCACCTCATGCATTT
GCTCATCATAAAAAGAATAATGTAGTGCCACCAACAGTCCCACCACAGCAGCCGCAAGAT
CTCCAGAATAATTTGACATTAAATACAAATATGTCAATTAATCTGACATTAAACACTAAT
ATGTCAATGAATCTACCATTCACAAATCCTCCGCCACCTATTCACAATGAAACGGTCATC
ATACCACATGGCCTGGCTCATCATACGAATATTAACCAGATACATCCCCTACCACCTCCA
CCACCACCGCCGCCACCAGAGGTCCCGAATAATTTTACAGATGACAAAAGTATGTCATTA
AATCATCCAATGATATTCACAAACCCACCGCCACCTTTACAAAACGAGTGA
Protein sequence:
MQVTEADQYSSKRVGVAEHLINFKSSPNFKNMKKFIRSKMDLIEKASHTAPDPPPPPNVG
NTVSSEVQPPLPLEPPPPDEIYSLNVKKELDDSKFENGPSEEVSETQSKEVVNEVTGSQQ
EPTEKPKETICRDFIRGSCKRPGTCRYAHKFDLSQLVGVYTFCRKYQTSVCTYPICKYVH
ASVFEEHHFYRTGVLPPHAFAHHKKNNVVPPTVPPQQPQDLQNNLTLNTNMSINLTLNTN
MSMNLPFTNPPPPIHNETVIIPHGLAHHTNINQIHPLPPPPPPPPPEVPNNFTDDKSMSL
NHPMIFTNPPPPLQNE