New model in OGS2.0 | DPOGS203326  |
---|---|
Genomic Position | scaffold6:- 283053-284541 |
See gene structure | |
CDS Length | 957 |
Paired RNAseq reads   | 21 |
Single RNAseq reads   | 57 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA002088 (8e-88) |
Best Drosophila hit   | CG6608, isoform A (3e-29) |
Best Human hit | mitochondrial thiamine pyrophosphate carrier (1e-30) |
Best NR hit (blastp)   | PREDICTED: similar to mitochondrial carrier protein, putative [Nasonia vitripennis] (8e-40) |
Best NR hit (blastx)   | PREDICTED: similar to mitochondrial carrier protein, putative [Nasonia vitripennis] (2e-38) |
GeneOntology terms    | GO:0055085 transmembrane transport GO:0005488 binding GO:0005743 mitochondrial inner membrane GO:0006810 transport GO:0016020 membrane GO:0005215 transporter activity GO:0016021 integral to membrane |
InterPro families    | IPR018108 Mitochondrial substrate/solute carrier IPR023395 Mitochondrial carrier domain IPR002067 Mitochondrial carrier protein |
Orthology group | MCL39636 |
Nucleotide sequence:
ATGGTCGGATACCGTCAAGATGATAATCTCACTCCAAATCAAAAGTTGATTGCCGGTTGC
ATCTCGGGCGTAGTCACTAGGTTCCTAACACAGCCTCTGGATGTGTTGAAAGTGAGAACT
CAGTTACAGGGTAAAATCTCTCGCAAGAAAAGGCTGAGTGTATTTGCGACTTTTAAAAAA
ATACTCTACGAGGAAAGCATTTTAGCGTTTTGGCACGGACATAATCTTGGACAGATGCAT
TCGGTTCTGTCCACGTCAAGCCAATTCTACGTTTATGAAGTAACAACGAAATATGTATTC
AGTTCCACAGTTAACTCTGAATATAAAACGCTCCTGGAATTCATGTGTGGGATTTGCGCG
GGTTGCTGTAGCGCGACCCTGGTAGCTCCAATAGAGGTGATACGTGTGAGGCAAATGTTG
ATTCAAGAACAGTACAGAGGATTTATAAATGGAGCCAAGGCAGTGTATAATTCGGGAGGA
GTACTGGCTTTCTATGAGGGCTGGACTGCTGGGGTTCTCATGCTTGGCCCTCAAGTTGGG
ATAACATTCTCCGTATTTAGTTTCATGCAACCACTATTATTGAACTACATGTATGATTGC
AATGGGGACTGCCTCCATAAAAAGGGGAATGCACATACAGCCCAAGATTTGTTACTAGCC
ACTACTATTGCTGGTGGAATGTCAGGATTCGTGTCAAAAGTCATGTGCTATCCTCTAGAT
TTAGCAAAACGAAGGTTACAAATCGCGAGTCACAGAGAAAACGCCAAATTCTACACCCCT
ACCACTTCGAGAGACTTAGTGAAATGCACCAAGCTAGTGCAGTGCGTAAGGGACACCGTG
AGGAGGGAAGGTTTCCTAGGTCTATACCGCGGTCTGTCGGTAACCATATATAAAGCTCAA
ATAACCAACATCCTTACGTTTACAACTTATGAATTTGTGTGTTATCTTATAAGGTGA
Protein sequence:
MVGYRQDDNLTPNQKLIAGCISGVVTRFLTQPLDVLKVRTQLQGKISRKKRLSVFATFKK
ILYEESILAFWHGHNLGQMHSVLSTSSQFYVYEVTTKYVFSSTVNSEYKTLLEFMCGICA
GCCSATLVAPIEVIRVRQMLIQEQYRGFINGAKAVYNSGGVLAFYEGWTAGVLMLGPQVG
ITFSVFSFMQPLLLNYMYDCNGDCLHKKGNAHTAQDLLLATTIAGGMSGFVSKVMCYPLD
LAKRRLQIASHRENAKFYTPTTSRDLVKCTKLVQCVRDTVRREGFLGLYRGLSVTIYKAQ
ITNILTFTTYEFVCYLIR