New model in OGS2.0 | DPOGS203332  |
---|---|
Genomic Position | scaffold6:- 175316-184691 |
See gene structure | |
CDS Length | 4617 |
Paired RNAseq reads   | 2303 |
Single RNAseq reads   | 5748 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA002098 (1e-86) |
Best Drosophila hit   | Jarid2 (3e-118) |
Best Human hit | protein Jumonji (3e-40) |
Best NR hit (blastp)   | conserved hypothetical protein [Culex quinquefasciatus] (2e-133) |
Best NR hit (blastx)   | hypothetical protein AaeL_AAEL010971 [Aedes aegypti] (4e-124) |
GeneOntology terms    | GO:0005634 nucleus GO:0003677 DNA binding |
InterPro families    | IPR001606 ARID/BRIGHT DNA-binding domain IPR003349 Transcription factor jumonji, JmjN IPR003347 Transcription factor jumonji/aspartyl beta-hydroxylase IPR013129 Transcription factor jumonji |
Orthology group | MCL14319 |
Nucleotide sequence:
ATGAAGACAAAAGTCCAAGCTCAACGCAAGTTCGCTCAAGGTGCCTATGTGCCGCCTGCA
CTCAACGTCTCTGGCGGAGGAATAGATAGAAGGACTGAGATATCACCTATAAAAGAAAAA
AGTGTCTTCCATAATAAAACATCAGCGAGGTCGCTGTTGGATATCGTAGCGTTTAAAAAT
TTACACAAACACGCCCAACCTATAGTATTGTTGGAACGGCTAGAAAACAGTCATCCTTTG
TGCTCAAAGGATCGATCAAATCCAATAGCCTTGGCCAAACCATCAGGCGTTACGATAAAC
AAAACAAGCCATGAACCGATCCCACCAGTATCCAACGCAACACATAGCTCGCCCATGTCA
CGTGACAGAACCAGGAACGCTAGGATCATTACGCCCAGGCTACCCATGCACTTGAGATCG
CGGGTAGTCACATACGGCGAGAGAAAGAAAGTCTTGGTCTCCAAGAAGAAGAACTTTGAG
AATCGCGAGAAGAATATTGTTAAAATACGGAATTCACGTGAATTGAGAAAGAAGAAACGA
CCCGACAATTATTCTGACGACTTCTCCATTGACGACGACAAGCCTCTAATGTTCTTCAGA
CAAAAGTCGTTGAGCTTAAAGAAAGATGCATCTATGAAGCAAAGAAAGATCAATAATAAA
CGCCCAAAGTCAGTTAAAAACTCCGAGCCAAAACCTAGAAATAAGACTAAAATTGTACGA
CCTGGCCTAAATCTGCAAGGTAAAGATGCAGTGAAACGTAGTTCGTCGTGTTTAGATCAA
AGCGCAGTACAAGGACCAGCGTCGTGCAGAACGAATATAAACCCCATACCAGGGCTACCG
TCCTCCAATAAAAATATTAGCCCTATCCTGGAAGCAGCGCCTTCCAATAAAGACGTAATC
CCTGTCCCAGAAACTTCGCCGACCACTACAAAAACTAACCCCGTTTCTGGTCTGCCAACA
CGCAACACCAATACAAATACTACACCACTGTCATCACAAGCTAAAGAGGAGGGACAAAAT
CTTGAACCATCATTTCCAAATAAAAACGTGGACTTTGTTCCTGGAACGGTAACACCAAAT
GTAAATGCGAATCTTATTAAAGTGCTTTCGACGTCCAATTTGATAGTGGACGCGAATGTT
AGACCAGCATTCGCTGGTATGAACATGGACACGAGCGGCGGTCAAGTACCAGACAAAATA
GACGTGAACCCTTACTCCTGGCCCGCCTCCCATATGAATATGGAAACTATTCCTGTGCAA
ACATTCCCTAATGGAAATATGGGACCCATTCCGGTAACGTCCCCACCCGGTATCAATGTG
AACCCCATTACGGGACCACAGTCACAGATATACGTGGTGAATGTACCGGGTTCATCGTCA
AATATATATGTGGTCCCCGTCCCGGGTGCATCAACCTTTGCATATGCGACCCCCGTCCCA
GCACCGACATCGACGAATTTATACGTGGACAGTATCCCCGGGCCATCGTCACTGAACATA
TACAAAGATCCTGTACCAGGACCGTCATGCACGGGCGTCTATGCTGTCGCTACTTCAGCT
CCGTCCACAAATATTTGTTCAGACAATGACCGAGGCCCTTTGTCATCAAATATTTATACG
GGCAATGTCTCTGAGCCGTCAGCATCAATGCCATGCGCAACGTCTGGTTCATTGCCATCA
TGCCTAAATACTCACCCAGCCCTAGCATCAGGTTGTTCATCTCCGAACGCATCCACAGCC
TCCACTGCCAGTTCACCATCCTCAAATCAAGTGCCGACAGCTTCTTCGTCAGAAATTTAT
TCGCATCCCGTCCCAGGAACTTCAAGTTCCAGTGTATGTTCAGACCCCATCCCGAATACA
TCCTCAAACGGACGTAACAAAAGAACCATAGCAAAGCAGAGACGGAAGTCGTCTACGAAG
TCAGCATCATCATTAACAAGGAAACGACCAATGGCGCTGAGAGCACCGTTTTATGGAATA
AAGATGATCGAGACCTGGTTGTCATCAGATTTTAGGGTGGTCACTGCACCACCGCCACCG
CCACCGCCTAAGAAGAAGTCCAACGACCCATCAGAAGCCAGAGGGGTAACTATGTCCCCA
GAACCTGAAATTGACGAGACTGAGCAATGTATCGGGGCAAAATTTTCAACTATAAAGGAC
ATCATAAACTACGGCCCGAGCTATTTCGATTGCCTGTGTCTGCAATGTGACCATTGCAAT
TATATTTATAAAATGTTGAACAAGTATAAACAGGATTCCAGTGCAGCCAGACATGTAGAG
GTCGGGATGAGGAAGCGGAAACACGAGGAATCCTTGACCGTGGAGCGTCAAGAAGCGTCG
GATTCCATGGTCATCGAGGTTTCAGACAGTGAGGATATAAATACGATCGACCTTACCGGT
GACACCGATGACCTCATGCAAGATAGTGAAGCTTCAAACTGCTCTCCAAAGCCAGCTAAC
AGTAGCAACCCGCAGCCAGAGAATGGCAGCCAGCAGAATGAAGCGCAACGCGATTCACCA
GGTGAAAGGTTGCAGAATCAATTAGCAAGGAATCTAGCGCAGCGGATACAAACACAACAG
AGCCAAAGACGAATTCAACAGAGGCAGAGGCAGCGTGTCGGCCGACAGGCGGGTTCCTCG
TTACGTGGCCGACAGAGAATTGTACCGAGGGCGGTCCAGCGGCCATTGAGGCGGGTAGTT
GTTAATAAAGTTGTGAACAGGAGATCGCTAACGAGGTACTCATACCAGACGAGCAAGCAC
TCTGATAACGTGTCCAGGATACTGCGAGACAAGATCATCACCGCTCCCGTGTTCTATCCG
ACTCTAGAGGAATTTTCGGATCCCATGGCCTATCTCGAGAAGATTATGAAATTTACGAAG
AAATACGGTATCTTCAAACTAGTGGCGCCAGACGAATATGAACCCACTTGTACTATATCC
GAGAACTTTAAATTCAGTACATCCCATCAATACATAGCTCGGTTCTTCAATCGCTGGGGT
CCCGCTGCTAGGGAACTATGTACCATGAGGGCTTATTTAGCTACACAGAACGTTCATTTC
AAACGAGGGCCTTTGCTAGGTGGTCTAGAGGTCGATCTGCCCAAAGTGTTCCATATCGTC
CAAAGACTGGGCGGCTTAAAGACTGTCATGGACAAAAAGAAATGGCATCGCATAGCCGAA
GAATTGAACCTTAGAAATTTACGTAACCCGGAGAAGAAGTTTGATAATTTATTCCTAAAG
TACTTGTTGCCATACAACAGTCTGACTAAAAGAGAACGGCAGGACATGATGATGAAGGTG
GAACAGAGGTGGATCAAGAAGAACAATAGACTGATGAAGCGTGTCGTGAACCCGCTGTAC
CGGCAGAAACGTATGCTGGGAGAGATCGAGTCGTCCGACGAGGAAGCCGAGGACGAGGAC
TATCTCACAGAGGCGCTCAATCTCGCCGAAGACTGTAGTCAACTAGGACGGAAGATGGGT
CTCGAGGCCTTCAAGAAGATTGCCGGAACCGCATTCAATATGTACTTCCCGGATGAGAAG
GCTCAGCCCACTGTAGCTGAGATCGAGGAGAAGTATTGGAACATTGTGCTGCTGGGCACC
CAGCATGTGTCGGTTAACACGGCATTCATAGAGAGCGGCGTAGAAGGAAACATATCACCC
AAAAGCAAGACGAGTGATGCTATCACCACCAGCCCCTGGTATTTGAAGAATCTGAGTACC
GACAAGAGTAATGTCCTACGCTTGCTCGGCTCGTTGGCTGGTATGACAGTGCCGTCGCTC
CACGTGGGGATGGTGTTTTCAACCAGTTGCTGGCACCGCGACCCCCATGGGTTACCATGG
ATGGATTACTTGCACCAAGGAACAGAGAAGATATGGTACGGAGTACCCAGCCACGAAGGG
CAGAACTTCCGATGCGCTCTGGAAACTCTCTGCCCTACTCTGTGCCAGAACAAAACATTG
TGGCTACCCTCCGAGATCGCAATGACACCGCTCAACCTCCTGTTAGACCGCAACATCAAA
CTGACACGCTGCGTACAGCGGCCGGGCGAATTCGTGTTCGTCAACCCCCAGGCGTATTCT
AGTTCGGTGTCAACTGACTTCACTGTTTCGGAGAGCGTTTACTTCGCTACCGAGTCCTAT
TTCGAAAACGTCAATCAGGCCTTCCAGGAGTTGAAGGAGAGCTGCGAGCCGTCGTCGTTT
TCGCTGGAACAGCTGCTGATATCCGCGGCCAAGGATCCGCATCTATCACCGAACGTTCTA
GAACACGTCAACAAACATCTCAACGACATAGTGTCCGAAGAGCTCTCCTTCAGGAGGGCG
CTCACCGACCTCAAAGTACCGTTGCTGCTGAATAAAAACCGTCCAACAATATGGAGTGCT
CGTGATGACGATGAATGCCAAGTCTGCAGGACGGCGTTGTATTTGTCGCGTGTAACGGGA
CTTTTCAAGAACGCCTCCGTGTGTCTGCAACACGCTCTGAGACTGATCAACTTGAAGAAA
GGGGCCGAGCTGAAGGCGTTGATAGCGACCCTCGCGATGGAAGTGACGATAAGCAATCAA
GAGCTACACGACATCGTCGTTAAACTGCAGAGGAGACTGTCGCAGAGAGCGAAGTGA
Protein sequence:
MKTKVQAQRKFAQGAYVPPALNVSGGGIDRRTEISPIKEKSVFHNKTSARSLLDIVAFKN
LHKHAQPIVLLERLENSHPLCSKDRSNPIALAKPSGVTINKTSHEPIPPVSNATHSSPMS
RDRTRNARIITPRLPMHLRSRVVTYGERKKVLVSKKKNFENREKNIVKIRNSRELRKKKR
PDNYSDDFSIDDDKPLMFFRQKSLSLKKDASMKQRKINNKRPKSVKNSEPKPRNKTKIVR
PGLNLQGKDAVKRSSSCLDQSAVQGPASCRTNINPIPGLPSSNKNISPILEAAPSNKDVI
PVPETSPTTTKTNPVSGLPTRNTNTNTTPLSSQAKEEGQNLEPSFPNKNVDFVPGTVTPN
VNANLIKVLSTSNLIVDANVRPAFAGMNMDTSGGQVPDKIDVNPYSWPASHMNMETIPVQ
TFPNGNMGPIPVTSPPGINVNPITGPQSQIYVVNVPGSSSNIYVVPVPGASTFAYATPVP
APTSTNLYVDSIPGPSSLNIYKDPVPGPSCTGVYAVATSAPSTNICSDNDRGPLSSNIYT
GNVSEPSASMPCATSGSLPSCLNTHPALASGCSSPNASTASTASSPSSNQVPTASSSEIY
SHPVPGTSSSSVCSDPIPNTSSNGRNKRTIAKQRRKSSTKSASSLTRKRPMALRAPFYGI
KMIETWLSSDFRVVTAPPPPPPPKKKSNDPSEARGVTMSPEPEIDETEQCIGAKFSTIKD
IINYGPSYFDCLCLQCDHCNYIYKMLNKYKQDSSAARHVEVGMRKRKHEESLTVERQEAS
DSMVIEVSDSEDINTIDLTGDTDDLMQDSEASNCSPKPANSSNPQPENGSQQNEAQRDSP
GERLQNQLARNLAQRIQTQQSQRRIQQRQRQRVGRQAGSSLRGRQRIVPRAVQRPLRRVV
VNKVVNRRSLTRYSYQTSKHSDNVSRILRDKIITAPVFYPTLEEFSDPMAYLEKIMKFTK
KYGIFKLVAPDEYEPTCTISENFKFSTSHQYIARFFNRWGPAARELCTMRAYLATQNVHF
KRGPLLGGLEVDLPKVFHIVQRLGGLKTVMDKKKWHRIAEELNLRNLRNPEKKFDNLFLK
YLLPYNSLTKRERQDMMMKVEQRWIKKNNRLMKRVVNPLYRQKRMLGEIESSDEEAEDED
YLTEALNLAEDCSQLGRKMGLEAFKKIAGTAFNMYFPDEKAQPTVAEIEEKYWNIVLLGT
QHVSVNTAFIESGVEGNISPKSKTSDAITTSPWYLKNLSTDKSNVLRLLGSLAGMTVPSL
HVGMVFSTSCWHRDPHGLPWMDYLHQGTEKIWYGVPSHEGQNFRCALETLCPTLCQNKTL
WLPSEIAMTPLNLLLDRNIKLTRCVQRPGEFVFVNPQAYSSSVSTDFTVSESVYFATESY
FENVNQAFQELKESCEPSSFSLEQLLISAAKDPHLSPNVLEHVNKHLNDIVSEELSFRRA
LTDLKVPLLLNKNRPTIWSARDDDECQVCRTALYLSRVTGLFKNASVCLQHALRLINLKK
GAELKALIATLAMEVTISNQELHDIVVKLQRRLSQRAK