New model in OGS2.0 | DPOGS203369  |
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Genomic Position | scaffold6:+ 98155-115972 |
See gene structure | |
CDS Length | 1359 |
Paired RNAseq reads   | 1111 |
Single RNAseq reads   | 3110 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA003895 (1e-45) |
Best Drosophila hit   | Ecdysone-induced protein 75B, isoform C (1e-45) |
Best Human hit | peroxisome proliferator-activated receptor gamma isoform 2 (2e-34) |
Best NR hit (blastp)   | ecdysone-induced protein 78C [Aedes aegypti] (1e-97) |
Best NR hit (blastx)   | ecdysone-induced protein 78C [Aedes aegypti] (9e-92) |
GeneOntology terms    | GO:0005634 nucleus GO:0004879 ligand-dependent nuclear receptor activity GO:0003704 specific RNA polymerase II transcription factor activity GO:0006355 regulation of transcription, DNA-dependent GO:0007591 molting cycle, chitin-based cuticle GO:0048477 oogenesis GO:0035072 ecdysone-mediated induction of salivary gland cell autophagic cell death GO:0018990 ecdysis, chitin-based cuticle GO:0007553 regulation of ecdysteroid metabolic process GO:0043565 sequence-specific DNA binding GO:0008270 zinc ion binding GO:0003707 steroid hormone receptor activity GO:0003700 sequence-specific DNA binding transcription factor activity GO:0019730 antimicrobial humoral response GO:0020037 heme binding |
InterPro families    | IPR001628 Zinc finger, nuclear hormone receptor-type IPR001723 Steroid hormone receptor IPR008946 Nuclear hormone receptor, ligand-binding IPR013088 Zinc finger, NHR/GATA-type IPR000536 Nuclear hormone receptor, ligand-binding, core |
Orthology group | MCL15233 |
Nucleotide sequence:
ATGGACGTGTGGGGCGGCATACCCGCTTCATGCGTTCACGCACCAACTCTGAACATTGAA
AACAGTGAATTCGCTCTCACTTTCATTGACAAAGAGACCACAACTTCACAGCAGAAACAA
GAGGCGGATAGCGCAGGCGCAGGCGGTAAGGCTGCCGCGCCGTGCAAGGTGTGCGGCGAC
AAAGCCTCCGGCTACCACTACGGCGTCACATCCTGCGAAGGTTGCAAGGGGTTCTTCAGA
CGCAGCATCCAGAAACAGATCGAGTACCGCTGTCTGCGGGACGGGAAGTGCCTGGTCATA
AGACTCAACAGGAACCGCTGTCAGTTTTGCAGATTCAAGAAGTGCTTGGCTGTAGGCATG
AGTCGCGATTCCGTCAGGTACGGCCGGGTGCCGAAGCGGCCACGGGAGGTCGTCAGCTCG
GAGAGCATGCCGGACTTGACCAAAAACCTGGGGGTCGGAACCCCAACACCTACCTCCTCG
GTAGAGGAAATGGACACGGACTCCCTCCAACTAGAGCTGGCCAGGGACCTCGCTAAAGTG
GTGATCACCGCTCATCGCAACAACGACGCGTATTCCGAGGACTACGTCCGCAGCATGCAC
CTGAAAGCTATCATTGTCAAGACGGAAGACGCTGATAACGACGGAAACGGAGGGGAGGAG
GCAGCATGCTCGGGCGCAGTGCGTGCTAATAAACTAACAGCTCTTTGGTACAATGTGGCG
GTGCGCATGACGCCCACCGTACAGCAAGTGGTGGAATTCGCCAAGCGTGTGCCCGGATTC
AACGTGCTGCCACAGGACGACCAGCTTATACTTATCAAGCTCGGGTTCTTCGAGGTGTGG
CTGTCTCGTATGGGCCGGATCTCCTCGGAGGCTACCATCTTATTCGATGACGGGAACTCC
ATCGACCAAACGCAGCTCGAGCTTATGTATGATATCCCGTTCGCGAAGTCGATGCTGGCG
TACACAGCTCGCATTAACAAGATGTGCATCACCGAGGACGAGATGGCGCTCTTCTCCGCC
ACCCTGCTGCTGTCCCCTCACCGGAACGGGCTGTCTGATAAGGACAAAATAACCGCTCTC
CACATGTCCCTAATGGAGGCCTTCCAATTCGTGGTGACCGAGTCCGGAATATCTGATGTG
CCGGCCCGCATGGAGGCATTCGCGGTGGCAACTCGCGAAGCCCGTGTCTTGGGTCTGCAG
CATAACGACCAGCTGACTTGGTGCCGGCTCAACTGGCAACGGCTGGTGCTGCCCGCTCTC
TTCTCTGAGATATTCGACATCCCGAAAGGGGAGGAAGAGGATCCGGAGGCCAGTGCTCTG
CCGTCACCTCCCTCATGCTCCGTGCCCCAACAGGGATAA
Protein sequence:
MDVWGGIPASCVHAPTLNIENSEFALTFIDKETTTSQQKQEADSAGAGGKAAAPCKVCGD
KASGYHYGVTSCEGCKGFFRRSIQKQIEYRCLRDGKCLVIRLNRNRCQFCRFKKCLAVGM
SRDSVRYGRVPKRPREVVSSESMPDLTKNLGVGTPTPTSSVEEMDTDSLQLELARDLAKV
VITAHRNNDAYSEDYVRSMHLKAIIVKTEDADNDGNGGEEAACSGAVRANKLTALWYNVA
VRMTPTVQQVVEFAKRVPGFNVLPQDDQLILIKLGFFEVWLSRMGRISSEATILFDDGNS
IDQTQLELMYDIPFAKSMLAYTARINKMCITEDEMALFSATLLLSPHRNGLSDKDKITAL
HMSLMEAFQFVVTESGISDVPARMEAFAVATREARVLGLQHNDQLTWCRLNWQRLVLPAL
FSEIFDIPKGEEEDPEASALPSPPSCSVPQQG