| New model in OGS2.0 | DPOGS203376 |
|---|---|
| Genomic Position | scaffold6:+ 272097-273841 |
| See gene structure | |
| CDS Length | 1203 |
| Paired RNAseq reads | 9 |
| Single RNAseq reads | 30 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002041 (3e-33) |
| Best Drosophila hit | I[[h]] channel, isoform I (3e-09) |
| Best Human hit | potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1 (2e-07) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC010173 [Tribolium castaneum] (6e-24) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC010173 [Tribolium castaneum] (4e-25) |
| GeneOntology terms | GO:0005221 intracellular cyclic nucleotide activated cation channel activity GO:0005886 plasma membrane GO:0005244 voltage-gated ion channel activity GO:0055085 transmembrane transport GO:0006813 potassium ion transport GO:0005249 voltage-gated potassium channel activity GO:0016020 membrane |
| InterPro families | IPR018490 Cyclic nucleotide-binding-like IPR014710 RmlC-like jelly roll fold IPR000595 Cyclic nucleotide-binding domain IPR013621 Ion transport N-terminal |
| Orthology group | MCL39630 |
Nucleotide sequence:
ATGGACCGACTGAAGCAGTTCCGTTTATACAGATCGACGATACATCCACTTAGCAAGTTT
AGACATGTATGGGACATCATCATGTTATTCGTTGTAGTTTTAAACATGGCACTGTTTTTT
CACAGCACTTCAAATATTTACGGTGAATTCGACTGGTCGGTTTATTTTATCGCTGTGATT
CTTGAATTTATTATCTTCCTAGATATTTATGTCACTTCGAGGACCGGCTACATTAACTAT
GAATCGAGGAAAATTGTCCTAAACTCAAAAAAAGTTTTAATCCACTACGCGTCAACTAAG
CTATTCGCACACGTTGTGTCATCGCTGCCTTTACAATGTTTACTGTTTTTGAGGCTCAAG
CACGGCGAAGATAAGCCGTTATCAAATGCAATGCTTATCTGCGTGGAATTTGCTAGGATA
TGCAAATCTTTCTTGCTATTTAGTTTCAGTCTCAAACCTCGTATATATTTTTTGGACAAG
ATAGCTTCGTTATTCGCGTACCTAGTAGCAATGGTATTCTATATGTGGAGTCTCATCGAA
TGTTATGTTTGCGTCGGTAGATTGTATTTTCCAGAAAATCAATTAGTCATGACTGTGGAG
GAAACTTCGAATTTGATCAAATGGCGACAATTACCTGACAGTTTTGCAAGGAAAGTGCGA
AAGTACTACGAATTTAACATGACAAGGCTTTCAATCACGGAAGCAGTGAACGGACTCTAT
AAGAATTTACCACAGAGTCTACGAAAGGATATTTCTTTGAGTTCTTATACGCATTTGATA
ATAAAAATACCATATTTTGCTGAATGGCCGTCTTTTTTGATTCAGAACATAGCGCTGTTG
CTACAAGAAGAACATTACATGCAAGGAGATCTTGTTGCTCAAGCGTCCGTTCATAGCGAT
GGTCTCATTATTATTGATGTAGGTGTGCTCGGTGTATATTCAATAAACAACGAAGAAAAG
GGGCATCTTATAGACGGAGACTATTTCTGTGAGTTGTCCTTAGTCACAGATAGAGAATTG
AGAATGTCGTCCGTAGTTGCCCTTACTCCCAGTAAGATATTATTCTTAGATAAGTTTCTA
TTTAGACATCTTATGAGGGATCACGTTGAACTTTTCACTGATATGAAAAATAGATTAACT
TCTAAATATAAGTCGCAGGACTCCAAAACTAACGAACAGCCGAATATTGTGGAGACATAT
TAA
Protein sequence:
MDRLKQFRLYRSTIHPLSKFRHVWDIIMLFVVVLNMALFFHSTSNIYGEFDWSVYFIAVI
LEFIIFLDIYVTSRTGYINYESRKIVLNSKKVLIHYASTKLFAHVVSSLPLQCLLFLRLK
HGEDKPLSNAMLICVEFARICKSFLLFSFSLKPRIYFLDKIASLFAYLVAMVFYMWSLIE
CYVCVGRLYFPENQLVMTVEETSNLIKWRQLPDSFARKVRKYYEFNMTRLSITEAVNGLY
KNLPQSLRKDISLSSYTHLIIKIPYFAEWPSFLIQNIALLLQEEHYMQGDLVAQASVHSD
GLIIIDVGVLGVYSINNEEKGHLIDGDYFCELSLVTDRELRMSSVVALTPSKILFLDKFL
FRHLMRDHVELFTDMKNRLTSKYKSQDSKTNEQPNIVETY