| New model in OGS2.0 | DPOGS203401 |
|---|---|
| Genomic Position | scaffold6:+ 940837-944427 |
| See gene structure | |
| CDS Length | 1152 |
| Paired RNAseq reads | 214 |
| Single RNAseq reads | 737 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013325 (6e-130) |
| Best Drosophila hit | CG5978 (3e-125) |
| Best Human hit | TBC1 domain family member 13 (2e-119) |
| Best NR hit (blastp) | PREDICTED: similar to CG5978 CG5978-PA [Tribolium castaneum] (5e-149) |
| Best NR hit (blastx) | PREDICTED: similar to CG5978 CG5978-PA [Tribolium castaneum] (3e-147) |
| GeneOntology terms | GO:0032313 regulation of Rab GTPase activity GO:0005097 Rab GTPase activator activity GO:0005622 intracellular |
| InterPro families | IPR000195 Rab-GAP/TBC domain |
| Orthology group | MCL12354 |
Nucleotide sequence:
ATGAGTTTACATAAAGCCAGGATTAAATTATTTGAGGGAATTCTGGAAAAAGATGTCATT
GACATTGAACAGCTTCAAAAACTGGCTTTTAATGGTGTGCCAGAGGAAAAGGGTCTACGT
TCACTGGTTTGGAAAATACTCCTTCATTACATTCCCACTGAAAAGAATTCATGGGACACA
ACACTCTGCAAGAAAAGACAACTGTATCAACAGTTCATTGATGAAATAATAGTCTCTCCA
GGTGGACCGACCGATCATCCACTGAACATGAGTCCTGATAGCTCTTGGAGCACTTACTTC
AAAGACAATGAGGTCCTCTTGCAAATTGACAAGGACGTGAGAAGACTGTGCCCAGACATA
TCTTTTTTCCAATCGGCAACCGAATTTCCTTGTTCGGAAATAGTTAATAGCAATGGTGTC
AAACGTCTCCACAAGAGAGTTGAGCAATCTGTTCTTAAATATTCTACATTGGAGAGAAGG
GGCCTGGGTGTTGCTAAGCTAAGCAATGAGATCAGACGTACAGATATATCAAGCGGTGAC
TATACTCCTCTGAATGAAGGATGCGAGGCGCATTGGGAGGTCGTCGAGCGGATGTTGTTC
CTCTACGCCAAGCTGAACCCCGGCCAGGGCTATGTTCAGGGCATGAACGAGATCATCGGA
CCAATTTACCACACTTTCGCCTGTGATGCCAACATGGAATTCAGGAAGTACGCTGAATCC
GACTGCTTTTTCTGTTTCACAAACCTGATGTCAGAGATACGGGATTTCTTCATACGGACC
TTGGATGAGACAGAGAGCGGTATCAACTATATGATGGGGAAGTTGAGTGATTGCTTGAAG
AAACAGGACAAGGCCGTGTGGGACAGGCTTAAGAAACAGGAACTGAGACCACAGTACTAC
AGCTTCAGATGGCTGACGTTGCTGTTGTCACAGGAGTTTTCTTTACCAGACGTTGAGAGG
ATCTGGGATTCTTTGTTTGCGGATGCGAGGAGATTTGATTTCCTTATATTTATTTGCTGT
GCCATGATTTTACTGGTCCGTGACAACATTCTCAACGGCGACTTCGCGTCTAACGTTAAA
TTGCTTCAAAACTTTCCACCCATGGACGTAACATTAATACTTAATAAGGCCCTCGAGATA
TCGTATACGTAA
Protein sequence:
MSLHKARIKLFEGILEKDVIDIEQLQKLAFNGVPEEKGLRSLVWKILLHYIPTEKNSWDT
TLCKKRQLYQQFIDEIIVSPGGPTDHPLNMSPDSSWSTYFKDNEVLLQIDKDVRRLCPDI
SFFQSATEFPCSEIVNSNGVKRLHKRVEQSVLKYSTLERRGLGVAKLSNEIRRTDISSGD
YTPLNEGCEAHWEVVERMLFLYAKLNPGQGYVQGMNEIIGPIYHTFACDANMEFRKYAES
DCFFCFTNLMSEIRDFFIRTLDETESGINYMMGKLSDCLKKQDKAVWDRLKKQELRPQYY
SFRWLTLLLSQEFSLPDVERIWDSLFADARRFDFLIFICCAMILLVRDNILNGDFASNVK
LLQNFPPMDVTLILNKALEISYT