| New model in OGS2.0 | DPOGS203414 |
|---|---|
| Genomic Position | scaffold6:+ 1451031-1453445 |
| See gene structure | |
| CDS Length | 1011 |
| Paired RNAseq reads | 381 |
| Single RNAseq reads | 1079 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012351 (3e-160) |
| Best Drosophila hit | cellular retinaldehyde binding protein (1e-59) |
| Best Human hit | alpha-tocopherol transfer protein-like (1e-21) |
| Best NR hit (blastp) | PREDICTED: similar to Cellular retinaldehyde binding protein CG10546-PA [Apis mellifera] (6e-125) |
| Best NR hit (blastx) | PREDICTED: similar to Cellular retinaldehyde binding protein CG10546-PA [Apis mellifera] (8e-120) |
| GeneOntology terms | GO:0016918 retinal binding GO:0005622 intracellular GO:0006810 transport GO:0005215 transporter activity |
| InterPro families | IPR001071 Cellular retinaldehyde binding/alpha-tocopherol transport IPR001251 Cellular retinaldehyde-binding/triple function, C-terminal IPR011074 Phosphatidylinositol transfer protein-like, N-terminal IPR008273 Cellular retinaldehyde-binding/triple function, N-terminal |
| Orthology group | MCL11330 |
Nucleotide sequence:
ATGTCGAGAAGGCTTACGAAAAGGTACTTGACCCCGGCGGATGCTTACAAATGCCCACTG
TCAGCAGAAACACAAGCGATAGCCGAAAAGGAGCTGAGAGAAACGGAAAATTCAAGGTCT
CAAGCCTTAGAGGCTTTAAGGATGTGGTTGGAACAGAATCCAAAATTCTTATCCATACGA
TTAGACGCCAATTTCCTTCTACGTTTTCTCCGTACAAAGAAATTCAGCGTTCCGATGGCT
CAAGAGGCTATCGAACGTTACGTACTCCTTAGACAGTCATGGGGGATAGCTTTTAATCAA
TTGGATCACACCTTGCCTGTCATTTCTGAGATCATCGAGTTAGGATATATTTTTGCAAGC
CCTTTCAAAGACAAACTTGGACGACGGGTTGTGATATACCGACCGGGCGTTTTCGATCCA
TACAAATTCACCAACCAAGACATGTGTCGAGTAATGGGTATTTGCTATGAGACACTCATG
GAAGACGAGGAGACCCAGGTGCGAGGTTTGGTGCATTACGCAGACGGCGGAGGTGTCAGT
TTTCCACACCTTACACTATTCACTCCAAGAGAAGCTGTGAGGATAGTAAAAAATGGGGAG
CGCACGATTCCACTAAGGCACAAGGAAATCTATGGTGCTAATGTTCATCCGACGATCAAA
TTTGCTTTAGACTTTGGGATGGCGCTCATATCTGAGAAGATCAGAAAGCGCGTCAAGTTA
TACACGTCCATAGAGGACGTAGAAATAGATAAACAACTTTTGCCTCAGGAGTATGGCGGT
ACAATGCCAATGAAAATAATGATTGAAAAATGGAAAGTGGAAATGGCAAGTAAGAGGGAA
ACGTTATTGATGAACGACAAGATGGCTGTCCGTCTAGAAATGTATAGCGAGGCGGCGCGA
GAGGGCGCTGTGTCCGCATTGAGAGCTGGTGGCACTTGTGCTGGTGCAGATTCTGTTGGA
GACGCGATGAGAGGACTCACCGGAAACTTCAGGAAACTTGAAGTCGATTAA
Protein sequence:
MSRRLTKRYLTPADAYKCPLSAETQAIAEKELRETENSRSQALEALRMWLEQNPKFLSIR
LDANFLLRFLRTKKFSVPMAQEAIERYVLLRQSWGIAFNQLDHTLPVISEIIELGYIFAS
PFKDKLGRRVVIYRPGVFDPYKFTNQDMCRVMGICYETLMEDEETQVRGLVHYADGGGVS
FPHLTLFTPREAVRIVKNGERTIPLRHKEIYGANVHPTIKFALDFGMALISEKIRKRVKL
YTSIEDVEIDKQLLPQEYGGTMPMKIMIEKWKVEMASKRETLLMNDKMAVRLEMYSEAAR
EGAVSALRAGGTCAGADSVGDAMRGLTGNFRKLEVD