| New model in OGS2.0 | DPOGS201642 |
|---|---|
| Genomic Position | scaffold737:- 46782-51883 |
| See gene structure | |
| CDS Length | 1650 |
| Paired RNAseq reads | 5840 |
| Single RNAseq reads | 12832 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008202 (0.0) |
| Best Drosophila hit | Bx42 (5e-163) |
| Best Human hit | SNW domain-containing protein 1 (1e-138) |
| Best NR hit (blastp) | PREDICTED: similar to Bx42 CG8264-PA [Apis mellifera] (0.0) |
| Best NR hit (blastx) | Puff-specific protein Bx42, putative [Pediculus humanus corporis] (3e-169) |
| GeneOntology terms | GO:0005634 nucleus GO:0035214 eye-antennal disc development GO:0000790 nuclear chromatin GO:0001700 embryonic development via the syncytial blastoderm GO:0005515 protein binding GO:0000398 nuclear mRNA splicing, via spliceosome GO:0071013 catalytic step 2 spliceosome GO:0071011 precatalytic spliceosome |
| InterPro families | IPR017862 SKI-interacting protein, SKIP IPR004015 SKI-interacting protein SKIP, SNW domain |
| Orthology group | MCL12524 |
Nucleotide sequence:
ATGGCGTCGTTGTCGAGCCTATTACCGGCTCCCGTGCAGCCAGTATGGGATCGAGATGAC
GAATTAAAGGCAAAGCGTGTTGGTAGTGCCCTTGTTGTTTCGCAGACCAGTGTTCCACCT
TACGGTCAAAGAAGAGGATGGGTCCCACGCACGGAAGAAGATTTTGGAGATGGTGGTGCG
TTTCCCGAGATACACGTAGCTCAATATCCATTGGGTATGGGAGCCCGTGGCAAGGAGAGC
ACATCGAATGCTTTAGCTGTCCAATTAGATGAGTCAGGAAGGGTGAAATACTCGGCTATA
GCTCGTCAAGGCCATGGAGCAGATAAGATAATCTACTCAAAGCTAACAGATCTTCTGCCA
TCGGAGGTGCTGTCAGAAGACGATCCAAGTCTCCAGAAACCTTCAGAGGAGGATATACAG
GAAATAACGGAGAAAACAAAATTAGCTCTTGAGAAACTGACCAATGCAAAGATATCAGCC
GCTATGCCGGTTAAAGCTGCTCCCAAGGCTGCTCCCGCCCAATACATCAGATACACTCCC
GCCCAACAGGGTGGACAGTTTAATTCGGGCGCCAAACAGAGAGTTATCAGAATGGTTGAA
GCCCAATCAGATCCTTTGGAGCCGCCTCGCTTTCAAATTAACCGTAAGATACCCCGCGCG
GCGCCTTCGCCCCCGGCCCCCGTGCTCCACTCGCCACCACGGAGAGTCTCCGTCAAACAA
CAGAGAGATTGGAAAGTCCCACCCTGTGTGTCACACTGGAAGAACGCCAAGGGTTACACA
ATACCGTTAGACAAACGTCTAGCGGCTGACGGCCGTGGTCTCCAACAGGTTCACATCAAC
GAGAACTTCTCCAAGTTGGCGGAGGCTTTGTACATAGCTGATAGGAAAGCTAGAGAGGCT
GTGGAGGCGAGAGCACAGCTGGAAAGGAGATTGGCTCAGAGGGAGAAGGAGAAGAAGGAA
GAACATTTGAGGATGCTGGCGCAGAGAGCAAGAGATCATAGAGCAGGTATAAGGAATCCG
GAAGATGAAGCAGAAGAGGGCTTAGACGCTGCCCCAGAGGGAGAGCTCTCTGTGGCGGAG
AGAGATAAGTTGAGAGCGGAGAGACACAGAGATAGGCAGAGAGATAGGAATCTGGCTCGA
GCTGCACCAGACAAGAGGTCCAAACTGGTGAAGGAGAGAGAACGCGACATATCCGAGCAA
ATAGCTCTGGGACTCCCGGCCAAGAACAACACGGGGGATGCCATGTTCGATCAGAGATTG
TTCAACAACAGCAAAGGAATGGACAGCGGTTACGGTGATGACGAGGCCTATACGGTGTAC
GATAAGCCGTGGAGAAATCAGGACGGCATTGGATCACATATATACAGACCCTCGAGGAAC
GCTGATAAGGATAACTACGGAGACGTTGATAGTCTAGCGGCTAACAAACGTTTCGTTGCT
GACAAGACATTTGCTGGGAGTAGCGGTGGAGCGCCTCGTTCAGGACCCGTCAACTTTGAG
AAGGATACCAGAGAGGAACCGAGTCGAGGCCAGCCCGAAGCTGATCCTGATCCGTTTGGT
TTGGATCGGTTCTTGAGTGAAGCCAAACGAGCTGATAAGGCGAGGAAGAGAGATCACCAC
GAGCCACACGCCAAGAGGAGGAGGGATTAG
Protein sequence:
MASLSSLLPAPVQPVWDRDDELKAKRVGSALVVSQTSVPPYGQRRGWVPRTEEDFGDGGA
FPEIHVAQYPLGMGARGKESTSNALAVQLDESGRVKYSAIARQGHGADKIIYSKLTDLLP
SEVLSEDDPSLQKPSEEDIQEITEKTKLALEKLTNAKISAAMPVKAAPKAAPAQYIRYTP
AQQGGQFNSGAKQRVIRMVEAQSDPLEPPRFQINRKIPRAAPSPPAPVLHSPPRRVSVKQ
QRDWKVPPCVSHWKNAKGYTIPLDKRLAADGRGLQQVHINENFSKLAEALYIADRKAREA
VEARAQLERRLAQREKEKKEEHLRMLAQRARDHRAGIRNPEDEAEEGLDAAPEGELSVAE
RDKLRAERHRDRQRDRNLARAAPDKRSKLVKERERDISEQIALGLPAKNNTGDAMFDQRL
FNNSKGMDSGYGDDEAYTVYDKPWRNQDGIGSHIYRPSRNADKDNYGDVDSLAANKRFVA
DKTFAGSSGGAPRSGPVNFEKDTREEPSRGQPEADPDPFGLDRFLSEAKRADKARKRDHH
EPHAKRRRD