| New model in OGS2.0 | DPOGS201651 |
|---|---|
| Genomic Position | scaffold737:+ 52422-57098 |
| See gene structure | |
| CDS Length | 966 |
| Paired RNAseq reads | 380 |
| Single RNAseq reads | 1677 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008121 (3e-55) |
| Best Drosophila hit | NC2alpha, isoform A (3e-33) |
| Best Human hit | dr1-associated corepressor (5e-27) |
| Best NR hit (blastp) | GH22636 [Drosophila grimshawi] (5e-36) |
| Best NR hit (blastx) | PREDICTED: similar to NC2alpha CG10318-PA [Tribolium castaneum] (1e-32) |
| GeneOntology terms | GO:0017055 negative regulation of RNA polymerase II transcriptional preinitiation complex assembly GO:0017054 negative cofactor 2 complex GO:0016565 general transcriptional repressor activity GO:0043565 sequence-specific DNA binding GO:0005622 intracellular |
| InterPro families | IPR009072 Histone-fold IPR003958 Transcription factor CBF/NF-Y/archaeal histone |
| Orthology group | MCL30431 |
Nucleotide sequence:
ATGCCGTCGAAGAAGAGAAAATATAATGCTAGGTTTCCAGCCGGACGTATTAAGAAGATA
ATGCAGACGGACGAAGAAGTGGGGAAAGTCGCGCAAGCTCTGTTCGTGGAATCGCTGCTG
AGTAAGGCTATGCAGGTGACTATCACGAGGAATGCAAAGACTCTCAGCCCGAGTCACGTG
AAGCAGTGCATCCTGGCTGAGACCAGGTTCGACTTCCTGAGGGACCTGGTCAAAAACATA
CCTGATGTAACCGCTGCCGAAGAAAGAGAAATGATGAGCGGAGAAAGTTCACCGAACTCG
TCCTCAAGATTATCTGATACCTCGGTCCCTCAAAGAGTTGTGCGACAGGACTCCAACAGT
TCGAGCAGTTCAGATATTAGGCTACAGGTGGCGCCACCCAAGGAACTTAAACGACGCTTG
TCGGTAGACACTGAGAAGAAACCGGACACCGTGACAGAATCAGCTATAGATTTGACAAAG
AAAATAGACGAGAAGCCGGTGGTCACCGCTAACTTCTACCAAGAGACTCTTCTCACTGAT
GAAGTGCAGCACAAGAGCGTCATCAAGGTCAATCCGACCTACACGAGCCCGCAACCTTCG
ACCTCGAGTTTCTCAACGCTGACCACAGTAGAGCCGGTTCCCAGGTTGGAACTGGCAGTG
CCAAAGCCCGAACAGTCACCGGTGTACTATCTAGACGTAAGGCAGAACCCCCAAAAGCCA
AGGACCCCAGTAACCCCCATCCTCAACATAGATTTCACCAAAAACTTCACCAAACCAGAA
ATAAAAGTGTTAGACACGTCCGCGGCGACCATGGTCGGCGGCAGGAACGACAAGAAGCCG
CAACGGCAGAGCGCGAGGGCGGCGAGGGACGTCAGGAAGAGCGACACGAAACTCGTGCCG
GCCGTCGTCGACGTGGACCATCTGAATTCAGGGAACCTGCAGATCGACGAGGACTATGAT
ACCTGA
Protein sequence:
MPSKKRKYNARFPAGRIKKIMQTDEEVGKVAQALFVESLLSKAMQVTITRNAKTLSPSHV
KQCILAETRFDFLRDLVKNIPDVTAAEEREMMSGESSPNSSSRLSDTSVPQRVVRQDSNS
SSSSDIRLQVAPPKELKRRLSVDTEKKPDTVTESAIDLTKKIDEKPVVTANFYQETLLTD
EVQHKSVIKVNPTYTSPQPSTSSFSTLTTVEPVPRLELAVPKPEQSPVYYLDVRQNPQKP
RTPVTPILNIDFTKNFTKPEIKVLDTSAATMVGGRNDKKPQRQSARAARDVRKSDTKLVP
AVVDVDHLNSGNLQIDEDYDT