New model in OGS2.0 | DPOGS210674  |
---|---|
Genomic Position | scaffold321:- 107892-108721 |
See gene structure | |
CDS Length | 363 |
Paired RNAseq reads   | 49 |
Single RNAseq reads   | 214 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA006292 (8e-53) |
Best Drosophila hit   | RpI12 (1e-33) |
Best Human hit | DNA-directed RNA polymerase I subunit RPA12 (2e-20) |
Best NR hit (blastp)   | transcription-associated zinc ribbon protein [Bombyx mori] (1e-51) |
Best NR hit (blastx)   | transcription-associated zinc ribbon protein [Bombyx mori] (3e-52) |
GeneOntology terms    | GO:0003899 DNA-directed RNA polymerase activity GO:0005736 DNA-directed RNA polymerase I complex GO:0006360 transcription from RNA polymerase I promoter GO:0045449 regulation of transcription GO:0008270 zinc ion binding GO:0003676 nucleic acid binding GO:0030528 transcription regulator activity |
InterPro families   | IPR001222 Zinc finger, TFIIS-type |
Orthology group | MCL10504 |
Nucleotide sequence:
ATGGCTGACACCGGTCCATTTACAACAAGTACAGCTTTTTGTGCTAAATGTGGTTCAATA
TTGCCTTTGTTACAAGAATTTGGCTCTGTTAAATGCTATGCTTGCAAAGCTTCCTATGAT
CCAGACAGTTACAGCAATATTAAGTTCAATTACACTATACATTTTAACACAGTTTCCGCT
TTGAGTAATGATAAAATTCTACATATGGACAACCCCGAAGGACCTGTTGTTGAACGAAAG
TGTCCAAAATGTGGTAATGATAGAATGTCCTATGCAACGCTACAGTTGAGATCTGCAGAT
GAAGGACAAACTGTATTTTACACCTGTATATCTTGCAAATACAAAGAAACTGAGAATTCA
TAG
Protein sequence:
MADTGPFTTSTAFCAKCGSILPLLQEFGSVKCYACKASYDPDSYSNIKFNYTIHFNTVSA
LSNDKILHMDNPEGPVVERKCPKCGNDRMSYATLQLRSADEGQTVFYTCISCKYKETENS