| New model in OGS2.0 | DPOGS210754 |
|---|---|
| Genomic Position | scaffold321:+ 110428-112743 |
| See gene structure | |
| CDS Length | 834 |
| Paired RNAseq reads | 1269 |
| Single RNAseq reads | 2703 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012860 (5e-24) |
| Best Drosophila hit | HP1c (3e-22) |
| Best Human hit | chromobox protein homolog 3 (6e-25) |
| Best NR hit (blastp) | PREDICTED: similar to chromobox homolog 1 [Tribolium castaneum] (6e-34) |
| Best NR hit (blastx) | chromobox homolog 1 [Xenopus (Silurana) tropicalis] (3e-30) |
| GeneOntology terms | GO:0003682 chromatin binding GO:0006333 chromatin assembly or disassembly GO:0005634 nucleus GO:0000785 chromatin |
| InterPro families | IPR000953 Chromo domain IPR017984 Chromo domain subgroup IPR016197 Chromo domain-like IPR008251 Chromo shadow |
| Orthology group | ND |
Nucleotide sequence:
ATGGAAGATTTATCGCAGTCTACTGATTTGCAATATCAACAAACTGATCCGGGCATTCCG
ATACATCAACCTATGGATACGGATGCGGAAAAGATTCCAAACACAAATATACAGCCGTCA
GAAAATGCCGGCCCTCAAAGTGGTAAACATGAAGAATTTTCCGTCGAGAAAGTTCTGGAT
AGAAGGATTAAAAATGGGAAAGTGGAATATTTACTTAAATGGAAGGGTTACTCCGACGAA
GATAATACTTGGGAACCAGAAGATAATCTAGATTGTCCTGATTTGATATCTGCATATGAA
GAAGCTCGCTTGAAACGGGAGCGCGAAGCAGCTACTATTCCTGACTTGGAAGAAGGTCAT
TTGACACGCAAAAGGGCTAAAAGAGGAGATAAGAAAAAGAAGGTCGAGGAAATTGAAAAA
CCTAGAGGTTTAGCCAGAGGTTTGCAGCCAGAGAAAATTTTAGCCGGTCAACTGTTTCAT
GGCACACTTTACTTCTTAGTTAAATGGCAGGAGTGTCCAGAAATGGATGTAGTTCCCGGA
CATGATCTCGGTCAGGCATTTCCGGACTTTGTTATCAATTACTATGAACAGTGTGCGCCG
TTTAGTGTCAGACATCCTGTTGGGAGAATACCGAGACCTGCTCCTGAGTTGCCGCCATTA
GAACAACCACAACCAGCTCCCGAGACTCCAATGGATGTGAGTCAAGAAGCGAGTCTCCCG
AGCACTTCATTAACTTCAATTGAAACAGATATTCCGGCTGAGCTGCCGGAAACTCAAACC
CAGCCACCAATCCCCGAAGCAGACACACAGCCTATCGAAGTACCAGTCAATTGA
Protein sequence:
MEDLSQSTDLQYQQTDPGIPIHQPMDTDAEKIPNTNIQPSENAGPQSGKHEEFSVEKVLD
RRIKNGKVEYLLKWKGYSDEDNTWEPEDNLDCPDLISAYEEARLKREREAATIPDLEEGH
LTRKRAKRGDKKKKVEEIEKPRGLARGLQPEKILAGQLFHGTLYFLVKWQECPEMDVVPG
HDLGQAFPDFVINYYEQCAPFSVRHPVGRIPRPAPELPPLEQPQPAPETPMDVSQEASLP
STSLTSIETDIPAELPETQTQPPIPEADTQPIEVPVN