New model in OGS2.0 | DPOGS212017  |
---|---|
Genomic Position | scaffold3855:- 205-10981 |
See gene structure | |
CDS Length | 2754 |
Paired RNAseq reads   | 711 |
Single RNAseq reads   | 1945 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA010171 (3e-23) |
Best Drosophila hit   | CG5205 (0.0) |
Best Human hit | activating signal cointegrator 1 complex subunit 3 isoform a (0.0) |
Best NR hit (blastp)   | AGAP001234-PA [Anopheles gambiae str. PEST] (0.0) |
Best NR hit (blastx)   | AGAP001234-PA [Anopheles gambiae str. PEST] (0.0) |
GeneOntology terms    | GO:0003724 RNA helicase activity GO:0004386 helicase activity GO:0005682 U5 snRNP GO:0000398 nuclear mRNA splicing, via spliceosome GO:0030532 small nuclear ribonucleoprotein complex GO:0003676 nucleic acid binding GO:0005524 ATP binding GO:0008026 ATP-dependent helicase activity |
InterPro families    | IPR023290 Sec63-domain IPR014001 DEAD-like helicase IPR001650 Helicase, C-terminal IPR004179 Sec63 domain IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal |
Orthology group | MCL10194 |
Nucleotide sequence:
ATGGCTTTCGAGAATATCAAGGAATTAAACCGCATCCAATCTGTTGTGTTCCAAACGGCG
TATAACACTAACGAAAATTTGCTCATTTGCGCCCCCACCGGCGCTGGTAAGACAAACATA
GCCCTGCTAACTGTAGTTCACCAGCTCAAACAGCATATAGAGAATGACGTCATCATGAAG
AATAAATTTAAGATTATCTACATAGCTCCTATGAAGGCACTGGCTTCGGAGATGACAGCC
AGTTTTGGCAAACGTCTTCAAAGTCTTGGCATCACGGTCCGAGAACTCACAGGAGACATG
AAACTAACTAAAGCAGAAGTTCAACAGACGCAGATGATTGTTACGACGCCCGAGAAATGG
GATGTTGTTACCAGGAAAGGGGCTACGGATACTGAATTGGCGTCAATAGTGAAATTACTC
ATCATAGATGAAGTACATTTACTACACGGAGACAGAGGACCCATAGTGGAGGCTATCGTG
GCCAGGACATTGAGACAGGTTGAATCAACTCAGAACATGATAAGAATCGTGGGCCTGTCA
GCAACGTTACCCAACTACGTCGATGTTGCCAGATTCCTCCGTGTGAACCCCAACATTGGT
CTATTCTACTTCGACTCCCGTTTCCGTCCGGTGCCGCTCGAACAGCAGTTTATAGGAGTG
AAGGAAATAGGTTCCGGCGGGGGAACACACCTGAGACAGATCCAGACAATGAACGAAATA
TGCTACGACAAAGCCTCTGAGATGGTGCAGAAAGGTCACCAAGTAATGGTTTTCGTTCAC
GCTCGTAACGCAACCCATCAGACGGCTTTGATTCTGAAAGAGATCGCCCAAAAGAAAGGA
CACCTCAAGTATTTTGAGCCCGAGGACTCTGGAGGTTTCTTAAAGGCCAAGAAGTCTATC
GGCAGCAGTCCTAACAAACAATTGGCAGAGCTCTTTTCCGCTGGTTTTGCCTGTCATCAC
GCTGGGATGTTGAGAAGCGATAGGAACATGGTAGAAAAATACTTCGCAGAGGGATACATC
AAAGTACTCGTGTGTACCTCAACACTGGCTTGGGGAGTCAATCTACCAGCACATGCGGTT
GTCATAAGGGGTACAGAAATCTACGACCAAAGTCACGGAACGTTCGTCGACCTCAGCATA
CTGGACGTGCTCCAAATCTTCGGTCGTGCTGGGAGGCCGCAGTTCGACACATCCGGCACA
GGCATCATCATAACGACCCACGACAAACTGACTCACTACTTGAAGAGTATGACCAATCAG
TTCCCGATAGAGAGCAACTTCATCAATCTCTTAGCAGACAATTTGAACGCCGAGGTGGCG
CTCGGCACAGTCACTAATATCGACGAAGCGGTTGAGTGGTTGAGCTACACTTACCTATTT
GTCAGAATGAGGATCAATCCGCAGGTCTACGGTCTGACATATACCGATGTCCAAGAGGAC
CCCACTTTGGAAACTAGGAGACGCGAACTAATTACAAGCGCGGCCATGCAACTAGACCGC
ACGCATATGCTGAGATACAACGAACGTACCGGAGACCTGCATATTACCGACCTCGGCCGG
ACGGCCAGCCACTATTACATAACATGTGAAACCATGGAGGTGTTCAACACCATGGTACGA
AAATCTATGACTCAGGGTTATGTGCTGGAGATGCTGACCAGGTGTTCGGATTTCCAGCAG
TTGAAAGTCAGAAAAGAAGAATTGACAGAACTGTGGAATCTGAAAGACATGTATTGTGAG
TTACGAATCGAAGACGCTCCAGAGGACATACACTGGAAGATCAACATCTTATTACAGACA
TATCTGTCACGCGGTCGGGTCAGCGGGTCCTCGCTGCAATCAGACTTGAATTACATCAGC
CAGACAGCTCGCCATTTGAAGAAATGCGCCGAGGAATTCCCATTGCTGGACATGGAGGCT
AGCTTACATCCTATAACGAGGACTGTATTGAGAATAAGACTCACCATCACACCCAACTTT
AAGTGGAATGACAAGTACCACGGTAAGGCACCAGAGGCCTTTTGGATCTGGGTCGAAGAT
CCCGACACCGACATAATGTACTACCATGAATATTTCCTCATTACCAAAAAACAAGTCATA
ACAAACGAGCCTCAAGAATTAGTTATAACGATTCCTATATCTGAGCCTTTGCCTCCTCAG
TACTATATCAGAGCTACTTCAGAAAGATGGCTAGGCTCAGAGAGTGTACTGCCTTTGACA
TTCCAACATCTAATTCTACCAGAAACTCATCCACCTCATACAGGTGACGTTTCACCGGAT
ATCCGGGCCATAAGACAGTCGCAAGTCATAGTGACGACTCCTGAGAAGTGGGACGGCATC
AGCAGGTCCTGGCAGACGAGGAATTACGTGAGGGACGTGGCTCTCATAGTCATAGATGAG
ATACACCTGTTGGGAGAAGATAGGGGACCGGTTTTAGAAGTCATTGTGTCCAGAACCAAT
TTCATAGAATCCCATACGTCTCGTCGTCTCCGCATCATAGGTCTCTCCACGGCCCTCGCC
AACGCTAAGGATCTAGCCAACTGGCTGAACATTGGAGAAATTGGATTATACAACTTCAGG
CCGTCCGTCAGACCTGTCCCGTTGGAGGTCCATATATCAGGCCACGCGGGTCGTCACTAC
TGTCCGCGGATGATGTCTATGAACAAACCCACATTCAGCGCTATCAGAACACACTCCCCT
GCCTCACCAGCTCTGGTCTTCGTGTCCAGTAGACGGCAGACCAGGCACGAGTAA
Protein sequence:
MAFENIKELNRIQSVVFQTAYNTNENLLICAPTGAGKTNIALLTVVHQLKQHIENDVIMK
NKFKIIYIAPMKALASEMTASFGKRLQSLGITVRELTGDMKLTKAEVQQTQMIVTTPEKW
DVVTRKGATDTELASIVKLLIIDEVHLLHGDRGPIVEAIVARTLRQVESTQNMIRIVGLS
ATLPNYVDVARFLRVNPNIGLFYFDSRFRPVPLEQQFIGVKEIGSGGGTHLRQIQTMNEI
CYDKASEMVQKGHQVMVFVHARNATHQTALILKEIAQKKGHLKYFEPEDSGGFLKAKKSI
GSSPNKQLAELFSAGFACHHAGMLRSDRNMVEKYFAEGYIKVLVCTSTLAWGVNLPAHAV
VIRGTEIYDQSHGTFVDLSILDVLQIFGRAGRPQFDTSGTGIIITTHDKLTHYLKSMTNQ
FPIESNFINLLADNLNAEVALGTVTNIDEAVEWLSYTYLFVRMRINPQVYGLTYTDVQED
PTLETRRRELITSAAMQLDRTHMLRYNERTGDLHITDLGRTASHYYITCETMEVFNTMVR
KSMTQGYVLEMLTRCSDFQQLKVRKEELTELWNLKDMYCELRIEDAPEDIHWKINILLQT
YLSRGRVSGSSLQSDLNYISQTARHLKKCAEEFPLLDMEASLHPITRTVLRIRLTITPNF
KWNDKYHGKAPEAFWIWVEDPDTDIMYYHEYFLITKKQVITNEPQELVITIPISEPLPPQ
YYIRATSERWLGSESVLPLTFQHLILPETHPPHTGDVSPDIRAIRQSQVIVTTPEKWDGI
SRSWQTRNYVRDVALIVIDEIHLLGEDRGPVLEVIVSRTNFIESHTSRRLRIIGLSTALA
NAKDLANWLNIGEIGLYNFRPSVRPVPLEVHISGHAGRHYCPRMMSMNKPTFSAIRTHSP
ASPALVFVSSRRQTRHE