| New model in OGS2.0 | DPOGS215377 |
|---|---|
| Genomic Position | scaffold183:- 17535-18083 |
| See gene structure | |
| CDS Length | 549 |
| Paired RNAseq reads | 159 |
| Single RNAseq reads | 824 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012390 (2e-96) |
| Best Drosophila hit | CG9220 (2e-73) |
| Best Human hit | chondroitin sulfate synthase 1 (1e-66) |
| Best NR hit (blastp) | Chondroitin sulfate synthase, putative [Pediculus humanus corporis] (5e-80) |
| Best NR hit (blastx) | Chondroitin sulfate synthase, putative [Pediculus humanus corporis] (2e-76) |
| GeneOntology terms | GO:0030206 chondroitin sulfate biosynthetic process GO:0008375 acetylglucosaminyltransferase activity GO:0015020 glucuronosyltransferase activity GO:0032580 Golgi cisterna membrane GO:0016758 transferase activity, transferring hexosyl groups |
| InterPro families | IPR008428 Chondroitin N-acetylgalactosaminyltransferase IPR003378 Fringe-like |
| Orthology group | MCL10993 |
Nucleotide sequence:
ATGACCGCGGAACAGTATCTGACTACTAGGGCTAGAGCGGTTTATGAAACCTGGGCTCAA
GATCTACCAGGCAGATTAGCGTTCTTTAGCTCGGAAGTATCGCGGGCCCCGGGTCTGCCT
CTGGTGTCGTTGCGGAACGTCGACGACAGTTATCCTCCGCAGAAGAAGTCATTCATGATG
CTGTTGTATATGTACGAGAATTACGGTGACAAGTTCGAGTGGTTCATGCGTGCGGACGAC
GACGTTTACGTGAGAGGTGACAAGTTGGGGCGGTTCTTGAGATCCGTGGACAGTAGGAAG
CCGCAGTTTATAGGGCAAGCTGGGAGAGGGACCAACTCAGAGAGGGACGCTTTGGCCTTA
GATTACAACGAGAACTTCTGTATGGGAGGGCCTGGAGTGCTGATGTCGCGGGAGACTCTC
CGGCGAGTGGCTCCTCACGTGAAGTACTGTCTGAAGCATCTTTACACGACACACGAGGAC
GTCGAGATCGGCCGCTGTGTCGCCAAATTCGCTGGAGTATCCTGCACCTGGAGCTACGAT
GTAAGTTGA
Protein sequence:
MTAEQYLTTRARAVYETWAQDLPGRLAFFSSEVSRAPGLPLVSLRNVDDSYPPQKKSFMM
LLYMYENYGDKFEWFMRADDDVYVRGDKLGRFLRSVDSRKPQFIGQAGRGTNSERDALAL
DYNENFCMGGPGVLMSRETLRRVAPHVKYCLKHLYTTHEDVEIGRCVAKFAGVSCTWSYD
VS