| New model in OGS2.0 | DPOGS215417 |
|---|---|
| Genomic Position | scaffold183:+ 37693-47472 |
| See gene structure | |
| CDS Length | 2778 |
| Paired RNAseq reads | 6492 |
| Single RNAseq reads | 18836 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012388 (8e-33) |
| Best Drosophila hit | Zn72D, isoform B (9e-124) |
| Best Human hit | zinc finger RNA-binding protein (5e-135) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC004366 [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC004366 [Tribolium castaneum] (2e-168) |
| GeneOntology terms | GO:0005622 intracellular GO:0008270 zinc ion binding GO:0003676 nucleic acid binding |
| InterPro families | IPR007087 Zinc finger, C2H2-type IPR003604 Zinc finger, U1-type IPR015880 Zinc finger, C2H2-like IPR006561 DZF IPR022755 Zinc finger, double-stranded RNA binding |
| Orthology group | MCL11574 |
Nucleotide sequence:
ATGGCTGCAAATAATTATTTTGGGTTTACCCATGGAGGGACCCAATATGGTGCGGCCACA
GCTAGCGCAGCTTACGGCGGCCAAACGGGGTACGCCGTGGCGCCTGCTGCGACCGCCGCG
ACGTACGGAACACAACGTGCCGCAGCTACAGGATATGATACTGCGTACCAGGCAGCAGCC
ACGCAGGCGGCCCATGCCCACGCCCACGCTCACGCGGCTGCTGCGGCGGCGTCGGCGTAT
GACGCGAGCAAGTCTGCGTACTACCAGCAAGCAGCGGCCGCCTACCCCGCCGCTGCTCCC
CCACAACCACAACCCACATATGATGCGGCGGCCAAGCCGGCTTACTCTACACCCGCAACA
TATGCGCAGCCGTTGGTGACTCAGTATGGCCAGGGCGGTGCTCGCGGGGGAGGCACCAAG
GCGGCGTACGGCAGCGTGTACACCGCCACCACCGCCGCGTCCTACCCCAGCCAGCCCTAC
ACCCAGCCCGCGGCACAACCCGCCAAGCAGACGGCTAACAGGGGCACCTCTGCTTATGAT
ACAGCTCTCTACAACGCGGCGACCATGTATGTGGCCCAGCAGAACAAAACCGGAGGCGGA
GGTGGCTGGAAGAACTATAAGGCCGGCGGAGCGGGTGCGGGCCAGGCGCGTCGCCCCAAG
CCGCCTCCTAAGGCGCAACAGCTCCACTACTGCGACGTGTGCCGCATCTCGTGCGCCGGT
CCTCAGACATACAAGGAACATCTCGAGGGACAGAAGCACAAGAAGAAGGAGGCGGCCGTT
AAGCTGGCGGCGGCGGGTGGCGGAGGCGGCGCGCGGGCCTGCGGGGCCTCGGCGCTGCGC
TGCGAGCTGTGCGACGTGACGTGCACCGGCGCGGACGCCTACGCCGCGCACGTGCGGGGC
ATCAAGCACCAGAAAGTGGTGAAGCTGCACACCATGCTGGGCAAGCCCATCCCCTCCACC
GAGCCTACCAAGCTGCAGCCCGCTCAAAGTAGAAAAGGCCCATATACAAGTGACATCGAC
GATTTGAGAGAAAATTCGACTTTCCCACCGCTAGCCAAAAAGACGGTGGCCGGCGCGCCC
AAGATCGCGTTCGTGGCGTCCGGGGGACTCAGCACCGTGGCCGCCGCTGACGCTCGCTCG
CCCGCAGACAAGGACGACGACAAGGACGACGAGCCCGAGGCCGAACCCGAGGTGCAGCCC
GTGGGGCAAGACTACATCGAGGAGATCCGGGGCGACGACGGCAAGGCTCTCAGCTTCAAC
TGCAAGCTGTGCGACTGCAAGTTCAACGACCCCAACGCCAAGGAGATGCACATGAAGGGG
CGCCGGCACCGGCTGCAGTACAAGAAGAAGGTACAACCCGACCTGGAGGTGAAAGTGAAG
CCGTCGATGCATCAGCGGAAGCTGGCCGAGGCGAAGGCGCAGCGCATGTTGGTGCGTGAC
GAGATATGGGCCAGGCGACGCATGCACGATGGAGGGGACGAGGACGAGCGACTGTACTGG
GAGGGAGCGGACTGGTGGAGGACGCCGCACCATCATCACCACCATGGCATGTCTCTGGGC
TACGGGCCAGTGGGGCGGCGGCCGGAGACGTCGGACGACCGGCACGTTCTCGCCAAACAC
GCCGACATCTACCCCTCGGAGGCCCAGCTGCAGGACATACAGCGAGCCGTCTCTCACACC
GAGAAGGCGCTCAAGTCGCTGTCGGACGCGCTCGCTGAACAGGCACGTCCTAAGGGTCAG
CCATCAAAATCACAAATCAAGCAGGAAGATAAGAAGGAGGAGAAGGTGGAGGGGAAGGAA
GACGGACGAGACAACCAACTGTTCTCGTTCGTGGCCGAGGGCGAGGCGGCTCCGTGCGCG
ACCTCTGGCGCCGCGCGCGCTTTGAAGGGAGTGATGCGAGTGGGTCTGCTGGCCAAGGGT
CTGCTGCTGCGAGGAGACAAGGACGTGCGTCTCGTGGTGCTCTGCCACGACCGACCCACC
GTCACGCTGCTCAAGAGGGTCGCCGCCGACCTGCCTGCGCATCTCAACAAGGTCAAGGGT
CCGTCTGAGGAGCCTCGTTACAAGGTGGAGCTGCAGGCGGCCGAAGGAGCCGTGCAGGTG
TCAGATGGGAACGTGGCCGTCAGGGTGTCGCTGACCTCCGCCGTCATGAGGGAACCGGCC
GAGGGTGGCGACATAAAGCGAGACGACAAGGATGTGCTACCGCGGCAGAAGTGTTTGGAC
GCGTTGGCCGCCCTTCGGCACGCCAAGTGGTTCCAGGCTAGGGCGGCCAGTCTGCAGTCG
TGCGTCATCATCATCCGCATCATGCGGGACCTCTGCCGCCGTGTACCCAACTGGACGCCG
CTCAACCCATACGCGATGGAGTTGCTGGTGTCGGGTGTGATGCAGTCGGCAGGGGGCGCG
TTGTCCCCGGGCGAGGCGCTCCGCCGGGTGTTGGAGGCGGTTGCGGGGGGCCTGCTGCTG
GAACACGGCCCCGGCCTGAGGGATCCCTGCGAGAAGGATCTCGTTGACGCGCTGGGTAAC
TTGCCACCACAGAAGAGAGAAGACCTCACAGCATCAGCGCAACAGTTCCTGAGAATGATC
GCCTTCAGACAGATACACAAAGTGTTGGAGATAGAACCTCTTCCCAAGTTGAAACACACC
ACGGGCTGGAAGTTCCCCCGCAAGCGACGCCGCTCCGCCGCCGACAACGAGTCAGACGCA
CCTAACGGTGAAGGCAAAGTAGTGAAGACGGAGGAAAAGGCGGACGCCACAGAGACGAGC
GTCGCCGCCAAGAAATAA
Protein sequence:
MAANNYFGFTHGGTQYGAATASAAYGGQTGYAVAPAATAATYGTQRAAATGYDTAYQAAA
TQAAHAHAHAHAAAAAASAYDASKSAYYQQAAAAYPAAAPPQPQPTYDAAAKPAYSTPAT
YAQPLVTQYGQGGARGGGTKAAYGSVYTATTAASYPSQPYTQPAAQPAKQTANRGTSAYD
TALYNAATMYVAQQNKTGGGGGWKNYKAGGAGAGQARRPKPPPKAQQLHYCDVCRISCAG
PQTYKEHLEGQKHKKKEAAVKLAAAGGGGGARACGASALRCELCDVTCTGADAYAAHVRG
IKHQKVVKLHTMLGKPIPSTEPTKLQPAQSRKGPYTSDIDDLRENSTFPPLAKKTVAGAP
KIAFVASGGLSTVAAADARSPADKDDDKDDEPEAEPEVQPVGQDYIEEIRGDDGKALSFN
CKLCDCKFNDPNAKEMHMKGRRHRLQYKKKVQPDLEVKVKPSMHQRKLAEAKAQRMLVRD
EIWARRRMHDGGDEDERLYWEGADWWRTPHHHHHHGMSLGYGPVGRRPETSDDRHVLAKH
ADIYPSEAQLQDIQRAVSHTEKALKSLSDALAEQARPKGQPSKSQIKQEDKKEEKVEGKE
DGRDNQLFSFVAEGEAAPCATSGAARALKGVMRVGLLAKGLLLRGDKDVRLVVLCHDRPT
VTLLKRVAADLPAHLNKVKGPSEEPRYKVELQAAEGAVQVSDGNVAVRVSLTSAVMREPA
EGGDIKRDDKDVLPRQKCLDALAALRHAKWFQARAASLQSCVIIIRIMRDLCRRVPNWTP
LNPYAMELLVSGVMQSAGGALSPGEALRRVLEAVAGGLLLEHGPGLRDPCEKDLVDALGN
LPPQKREDLTASAQQFLRMIAFRQIHKVLEIEPLPKLKHTTGWKFPRKRRRSAADNESDA
PNGEGKVVKTEEKADATETSVAAKK