DPGLEAN08943 in OGS1.0

New model in OGS2.0DPOGS204137 
Genomic Positionscaffold1311:- 1992-3714
See gene structure
CDS Length345
Paired RNAseq reads  87
Single RNAseq reads  706
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA013623 (7e-42)
Best Drosophila hit  elongin B (5e-38)
Best Human hittranscription elongation factor B polypeptide 2 isoform b (2e-28)
Best NR hit (blastp)  PREDICTED: similar to Elongin B CG4204-PA [Apis mellifera] (6e-43)
Best NR hit (blastx)  PREDICTED: similar to Elongin B CG4204-PA [Apis mellifera] (4e-42)
GeneOntology terms








  
GO:0005515 protein binding
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005667 transcription factor complex
GO:0005829 cytosol
GO:0016251 general RNA polymerase II transcription factor activity
GO:0030891 VCB complex
GO:0045449 regulation of transcription
GO:0045944 positive regulation of transcription from RNA polymerase II promoter
GO:0004842 ubiquitin-protein ligase activity
InterPro families
  
IPR019955 Ubiquitin supergroup
IPR000626 Ubiquitin
Orthology groupMCL14431

Nucleotide sequence:

ATGATTAGGCGAAAAAAACTTACCATCTTTACGGATGCCAAAGATACAACAACTGTTTTG
GAATTGAAGAAAATGATAGAGGGCATCTTGAAAGTAGCTCCTCCGAGTCAAATGCTTTTT
AACAAGGATAGCCAGCTCATGGACGATGACAAAACTCTGGCAGAGTACGGTCTTACTTCA
GCCACTGCCAAAGCTCAATGCCCGGCACCAATTGGACTTGCTTTAAGAAAAGAGAATGGT
GAATTTGAGGCTCTAGAACTGACTCCGTACTCGTCTCCCCCGGACCTGCCTGATGTTATG
AAATCCCAGGAGACAAATGGACAGGAACAGATGGATCAACACTAA

Protein sequence:

MIRRKKLTIFTDAKDTTTVLELKKMIEGILKVAPPSQMLFNKDSQLMDDDKTLAEYGLTS
ATAKAQCPAPIGLALRKENGEFEALELTPYSSPPDLPDVMKSQETNGQEQMDQH