| New model in OGS2.0 | DPOGS204102 |
|---|---|
| Genomic Position | scaffold1311:+ 4707-8499 |
| See gene structure | |
| CDS Length | 1425 |
| Paired RNAseq reads | 264 |
| Single RNAseq reads | 658 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013591 (2e-101) |
| Best Drosophila hit | deformed wings (1e-22) |
| Best Human hit | zinc finger protein 836 (2e-26) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC004467 [Tribolium castaneum] (1e-41) |
| Best NR hit (blastx) | PREDICTED: similar to Zinc finger protein 208 [Rattus norvegicus] (1e-34) |
| GeneOntology terms | GO:0003677 DNA binding GO:0046872 metal ion binding GO:0005634 nucleus GO:0008270 zinc ion binding GO:0005622 intracellular GO:0006355 regulation of transcription, DNA-dependent |
| InterPro families | IPR007087 Zinc finger, C2H2-type IPR015880 Zinc finger, C2H2-like IPR013087 Zinc finger, C2H2-type/integrase, DNA-binding |
| Orthology group | MCL40871 |
Nucleotide sequence:
ATGGATTGTCTTCTGCAAGAAAAATCAGGTTGTGTCGCCTGTAAGCAGAACGTTAGTGAG
CCTGAAACAATCGAGAGTTCAGAACAGAATCCTCCGCTGACGCCGGTTGAAAGCTACGAA
GAACCAGCAGCCTGTGAAGATGCTTCTAACGAGGATAACGCAAACATTGTAGACCCCAAT
TCTAAGAAAAAATTAGAAATCTCTCACATTAGGATAGAAATGGATGGTGATAGAAAGTGT
TATACATGTACAGTGTGCAAGAAAAAATTTTATGCTCGAAGCCAGGTGTCATATCATGCT
TACTGCAACGGTCAGAAAAAACCATACAATTGTCAACTTTGTAAGCAGAGCTTTGCATCC
CTATCACATTATAAATACCACACTCGAGTGCACAGCCAGGAACGTTCTTATGGCTGTGAT
GTATGCGGAGCAGGCTTCTATCAGATGTCAAAGCTGAAGAGGCACAAGTTGAAACATACC
AAAGAGAAGAATTTCTCGTGCAGTGAGTGCAATAAAGCATTCAACAACATGTCCTCGCTG
AGAAAACATGCTCGAACACACACCGAGGAACGACCGTACTCGTGTAACACATGCGGCAGG
CGATTCAGAGACAGCTCCAACTATAAGAAACATGTCGATAAACACAAGAAACCATGCAAG
TCGTGTGGAATGGAGCTTCAGGCGTCTGGTGTGCATCGCTGCGAAGGTCCTGGTAGTGGC
AGTCCTGGTGGTAGGGGGAATGGTGGTGGGCCCACCACGGGGGGGCCTCGCGCTCACGCC
TGCCCCCGCTGCAGGAAGGCCTTCCACTCCCGGAAGGACATGAGACGCCACGCAGCCATT
CACTCAGATTCTAAACCGTTCCGCTGCAAAGCCTGCCCTGACGAACGACGTTTCAGACGC
AAAGATAATTTAGAGCGGCACATCCGCAATGCACACCCCAACTGCGCACCCGCCACAGCT
CTGGAATGCGATCTGACCGCCCTCCAGAGCGTAGCCCACCACGCCTATGAAATACACGAG
AAGATACGCCTAGAAATTCTCAACCCATTACCGCCTCTACCTCAGGAAGTCATCCAGAAA
CACATAGACGTCGAGGTCGTTGACAAAAAGTCGATCATAGAGGCGAACAACGCCAGGGAG
AGCGTCATAGTCGAGAAGAAACCCGAGGAGAAGAAGGTCGTTACTCCAGAGAACGAATAT
GTCCATAAAATAAGGAAAGCCATAATACCTCTACCGCCCATAGACCAGGAGAAGTTCAGG
AGCGTTCAGAGAGGATTGTTACCGGACAGCGTGGCCGCAGCACCCATCAAGAATATGGAG
ATATACAAGAAGATACTGTACGAGAAGATAGAGAAGGACTCGGCCGAGGTCATACAGAAC
CCCAAGATGCATTGGAGGAGGAAGATGGAACAGGATAGCAATTAG
Protein sequence:
MDCLLQEKSGCVACKQNVSEPETIESSEQNPPLTPVESYEEPAACEDASNEDNANIVDPN
SKKKLEISHIRIEMDGDRKCYTCTVCKKKFYARSQVSYHAYCNGQKKPYNCQLCKQSFAS
LSHYKYHTRVHSQERSYGCDVCGAGFYQMSKLKRHKLKHTKEKNFSCSECNKAFNNMSSL
RKHARTHTEERPYSCNTCGRRFRDSSNYKKHVDKHKKPCKSCGMELQASGVHRCEGPGSG
SPGGRGNGGGPTTGGPRAHACPRCRKAFHSRKDMRRHAAIHSDSKPFRCKACPDERRFRR
KDNLERHIRNAHPNCAPATALECDLTALQSVAHHAYEIHEKIRLEILNPLPPLPQEVIQK
HIDVEVVDKKSIIEANNARESVIVEKKPEEKKVVTPENEYVHKIRKAIIPLPPIDQEKFR
SVQRGLLPDSVAAAPIKNMEIYKKILYEKIEKDSAEVIQNPKMHWRRKMEQDSN