DPGLEAN08955 in OGS1.0

New model in OGS2.0DPOGS214557 
Genomic Positionscaffold1337:+ 22941-26971
See gene structure
CDS Length573
Paired RNAseq reads  20
Single RNAseq reads  105
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA003220 (2e-83)
Best Drosophila hit  glutamic acid decarboxylase 1, isoform C (1e-78)
Best Human hitglutamate decarboxylase 1 isoform GAD67 (7e-51)
Best NR hit (blastp)  PREDICTED: similar to AGAP005866-PA [Tribolium castaneum] (6e-86)
Best NR hit (blastx)  PREDICTED: similar to AGAP005866-PA [Tribolium castaneum] (4e-84)
GeneOntology terms








  
GO:0004351 glutamate decarboxylase activity
GO:0006538 glutamate catabolic process
GO:0042136 neurotransmitter biosynthetic process
GO:0007528 neuromuscular junction development
GO:0008345 larval locomotory behavior
GO:0009449 gamma-aminobutyric acid biosynthetic process
GO:0045213 neurotransmitter receptor metabolic process
GO:0007416 synapse assembly
GO:0030170 pyridoxal phosphate binding
GO:0009612 response to mechanical stimulus
InterPro families


  
IPR015424 Pyridoxal phosphate-dependent transferase, major domain
IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1
IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2
IPR002129 Pyridoxal phosphate-dependent decarboxylase
Orthology groupMCL39730

Nucleotide sequence:

ATGGGAACTCTGCTGCAGTGTTCAACTGTTCACTTCAGATATGAGGGTATACTTCTGAGC
TGTAACGCTATGTCAGCGGAGTATCTTTTCATGACGGACAAGATTTACGATCCTAGATAC
GACACAGGCGACAAAGTCATCCAGTGTGGTCGCCACAACGATATATTCAAACTGTGGCTT
CAGTGGCGTGGCAAGGGTACAACCGGCTTCGAGCGTCACATGGACCGTCTGATGGAACTG
TCCGAGTACATGGTGCGTCGCATCAAGGAACAGTCTGACAAGTTCCACCTCATCCTCGAA
CCGGAGATGGTGAACGTTAGCTTCTGGTACCTGCCCATCCAGCTCAGGGGACAACACCAC
GATAAGAACAAGGAGATCAAACTTGGAAAGGTATGCGCCAAGCTGAAGGGTCGTATGATG
CAAGCCGGCACTATCATGGTCGGCTACCAGCCAGATGACCGTCGACCAAATTTCTTCAGG
AACATTATCTCCTCAGCTGCTGTCACTGAACGAGATGTGGACTTCCTCCTCAGCGAGATG
GACCGCCTCGGACACGACATCGTCGTCGACTAA

Protein sequence:

MGTLLQCSTVHFRYEGILLSCNAMSAEYLFMTDKIYDPRYDTGDKVIQCGRHNDIFKLWL
QWRGKGTTGFERHMDRLMELSEYMVRRIKEQSDKFHLILEPEMVNVSFWYLPIQLRGQHH
DKNKEIKLGKVCAKLKGRMMQAGTIMVGYQPDDRRPNFFRNIISSAAVTERDVDFLLSEM
DRLGHDIVVD