| New model in OGS2.0 | DPOGS212036 |
|---|---|
| Genomic Position | scaffold858:- 32504-34926 |
| See gene structure | |
| CDS Length | 831 |
| Paired RNAseq reads | 305 |
| Single RNAseq reads | 942 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010004 (2e-98) |
| Best Drosophila hit | syntaxin 13 (3e-29) |
| Best Human hit | t-SNARE domain-containing protein 1 (2e-16) |
| Best NR hit (blastp) | syntaxin [Bombyx mori] (4e-93) |
| Best NR hit (blastx) | syntaxin [Bombyx mori] (2e-85) |
| GeneOntology terms | GO:0016081 synaptic vesicle docking involved in exocytosis GO:0005886 plasma membrane GO:0005484 SNAP receptor activity GO:0016192 vesicle-mediated transport GO:0007269 neurotransmitter secretion GO:0007143 female meiosis GO:0007067 mitosis GO:0007140 male meiosis GO:0007110 cytokinesis after meiosis I GO:0000281 cytokinesis after mitosis GO:0006886 intracellular protein transport |
| InterPro families | IPR010989 t-SNARE IPR006012 Syntaxin/epimorphin, conserved site IPR006011 Syntaxin, N-terminal IPR000727 Target SNARE coiled-coil domain |
| Orthology group | MCL15290 |
Nucleotide sequence:
ATGACAGAACGAGAACCTATAAGTGGGTCGAGCCGTGATTATGGTTCTACGGCAGCACCA
CTCACCGTCGCCTTTGCTGACTTTAGCCCCACAGAACTTTACAACCTCAGCGAAGGAATA
GCAGACAATGTGAACACTATTAACAATGGACTACAGGCTCTACAAAAGTTGATGAAACAA
ATCGGTGGACCCAATGATAGTGTGCAGCTAAGAGATAAAATTCATGACACACAACAAAAT
GTAAATGGCTCTATATCAGCTACGGCTCGAGATATACAAAGACTAGGTGTGGTTGTCCGT
CGAGGAGATAAACCCCAGAAGCTGCAAGTGGAACGATTGACACAAGTGTTCAGAGAGACA
CTGGCAAGATACTCTTCTATGCAAAAACAATTATCAGAAAAAATGGCTGAACATATGCCG
ACACAGGCAAGGCAAAGGAATGATCCGGATGCTTTAGAACGACAAGCTATAGCTGATGAC
GAAGAATCAGCGCTTCTAGCAAATCAGCAAGCACAGGCTCGTCTAATACAATTTGAAACT
AGTATGTTATTAGAAAAGGAAGCATATATGAATAAAATCGAGGCTGACGTGTTAGATGTG
AACCAAATTATGCAAGATTTGGCCGAAATGGTCAACGCTCAAGGACAGAAAGTTGATACG
GTAGAAAGTCATATAGAAGCGGCTAGTGCCGGCGTCGAAGCGGGAGTTGATGAATTAGCC
AAGGCGGCCGAATATCAACGGAGATACAGAAGAAAAATGTTCTTTTTCATATTAATCGGT
GTGATTCTAGCAATTATTTTCATTATATGGGTAGTGAAAGCTTTCAAATAA
Protein sequence:
MTEREPISGSSRDYGSTAAPLTVAFADFSPTELYNLSEGIADNVNTINNGLQALQKLMKQ
IGGPNDSVQLRDKIHDTQQNVNGSISATARDIQRLGVVVRRGDKPQKLQVERLTQVFRET
LARYSSMQKQLSEKMAEHMPTQARQRNDPDALERQAIADDEESALLANQQAQARLIQFET
SMLLEKEAYMNKIEADVLDVNQIMQDLAEMVNAQGQKVDTVESHIEAASAGVEAGVDELA
KAAEYQRRYRRKMFFFILIGVILAIIFIIWVVKAFK