| New model in OGS2.0 | DPOGS202692 |
|---|---|
| Genomic Position | scaffold50:- 52802-56720 |
| See gene structure | |
| CDS Length | 951 |
| Paired RNAseq reads | 184 |
| Single RNAseq reads | 516 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004859 (4e-90) |
| Best Drosophila hit | ND |
| Best Human hit | N-acetylneuraminate lyase (5e-39) |
| Best NR hit (blastp) | PREDICTED: similar to N-acetyl neuraminate lyase [Tribolium castaneum] (6e-73) |
| Best NR hit (blastx) | PREDICTED: similar to N-acetyl neuraminate lyase [Tribolium castaneum] (2e-70) |
| GeneOntology terms | GO:0005737 cytoplasm GO:0016829 lyase activity GO:0005975 carbohydrate metabolic process GO:0003824 catalytic activity GO:0008152 metabolic process GO:0005575 cellular_component GO:0008747 N-acetylneuraminate lyase activity |
| InterPro families | IPR020624 Dihydrodipicolinate synthetase, conserved site IPR002220 Dihydrodipicolinate synthetase IPR013785 Aldolase-type TIM barrel |
| Orthology group | MCL11730 |
Nucleotide sequence:
ATGACAGATAAGTTGAAAACGTATGCTCGTGTTTCCAAGATGGTTGTTTTTAACGCTAGA
GGCTTAGTGCCGCCGGTTTTCACCGCTCTGAATGATGACTACAGTGTGAATTATGCTGCC
ATTCCTGGTTACGCCAATTATCTGGCTTCGAATGGAATAAAGGGAGTCCTGGTTGGAGGC
ACTACAGGAGAAAATATGTCTCTCTCTGTATCTGAAAGAAAGAAAATAGCTGATGAGTGG
GTGAAGGCCGGAAAGATTCACGGCTTGCACATCATGGTACAAGTTGGTGGGGCGCCTTTT
GTAGACGTCATTGAATTGGCAAAACATTGCTCGAAAATCGGAGTGGATTCGTTACTTACA
TTACCGGAGCTCTACTTCAAGCCTCAATCGGTAACCGAGTTGGTTTCGTATGTTGAATTG
GTAGCGCAGGCTGCCCCCAACTTACCGGTTTTATACTATCATATACCATTTATGAGTAAT
GTTGCCATGAACATGCCAGCTTTTGTGACAGAAGCGACAAAACGGATCCCCAATTTCAAA
GGTCTCAAATTCACCAGCAACGATTTGTCTGAAGGGTCCCAAACCTTACGAGCCTTGAAG
AATGATCAGGAGATATTCTTAGGAGCGGATACTCTGCTGGCTCCAGCGGTACTTCTCGGT
ATAAAGTCCAGTATCGGTACCACGTACAATCTGTTCCCGCGGCAAGCTCAGGATATAATG
GATGCGGTAGCTTGCTCAGACCTTGAACGTGCTAAAGCTTTACAGGAACAGTTGAACAAA
GCTGTAGAGGCTTTCACGGCCGAAGGCCCCTGGGTCCCCACTTTAAAGGCTGCGATGGAG
ATCGTTACCGGCATGAAATTCGGCCCCCCGGCCTTACCTCAAAGACCGATTTCTGAAGCA
GCGAGAAAAAGAATTGAAGAAGAGCTTAGGATTTTGAAACTAATAAATTGA
Protein sequence:
MTDKLKTYARVSKMVVFNARGLVPPVFTALNDDYSVNYAAIPGYANYLASNGIKGVLVGG
TTGENMSLSVSERKKIADEWVKAGKIHGLHIMVQVGGAPFVDVIELAKHCSKIGVDSLLT
LPELYFKPQSVTELVSYVELVAQAAPNLPVLYYHIPFMSNVAMNMPAFVTEATKRIPNFK
GLKFTSNDLSEGSQTLRALKNDQEIFLGADTLLAPAVLLGIKSSIGTTYNLFPRQAQDIM
DAVACSDLERAKALQEQLNKAVEAFTAEGPWVPTLKAAMEIVTGMKFGPPALPQRPISEA
ARKRIEEELRILKLIN