New model in OGS2.0 | DPOGS202702  |
---|---|
Genomic Position | scaffold50:+ 73214-82156 |
See gene structure | |
CDS Length | 2367 |
Paired RNAseq reads   | 623 |
Single RNAseq reads   | 1596 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA004814 (1e-180) |
Best Drosophila hit   | CG13654 (7e-64) |
Best Human hit | transmembrane protein 8A precursor (1e-31) |
Best NR hit (blastp)   | conserved hypothetical protein [Culex quinquefasciatus] (2e-103) |
Best NR hit (blastx)   | conserved hypothetical protein [Culex quinquefasciatus] (2e-91) |
GeneOntology terms    | GO:0007155 cell adhesion GO:0003674 molecular_function GO:0008150 biological_process GO:0016020 membrane GO:0005887 integral to plasma membrane |
InterPro families    | IPR013032 EGF-like region, conserved site IPR000742 Epidermal growth factor-like, type 3 IPR021910 Protein of unknown function DUF3522 |
Orthology group | MCL15426 |
Nucleotide sequence:
ATGTATCGAAGCTATAGGACTGTATCGGTAGTGTTTTATCAAGTAAGCAGTGATATCAAC
GATGCCCAATTCACATTTCAGTCAGAGGAACTACATCTTAATAACATAGGCGGAAAACAA
GTAGACGGCCTACTTGATGGAAGGTCGTCACCGCCGCCCATGGAAATCTGCAATATAAGG
GTTGTTGCGGATGCGTTGCCGACCTTGATGGTGGAAGAGAGAGGAAAAGGGTGGGATAAA
GGAAGGGGTAGAAAAGGGCGGGAAAATGGCTCCTGCAGCCCTCAGGAGGTGATCATCCAG
ATCAAGTATGGATCGTATCCAGCAGTTAATCCAGATGGTTATCAGTTCCCAAAGAACTTC
GTGAATCCAGCTAACAGGGAGAGCATCCAGACCTTGGAGATGATGTCCGATGGCAGCAAT
ATCACCTATTCCATCAGCAATCCAAGGTCTGGTATTTATTATGCCATGGCGTACGTCAAG
TGGGAAGATCCCAGAAATCAAAAAGTTGAACAAGAAGGTTTGGTGGCAAATTGCCGTACC
ATTTTATACACGGATCTCCAAGTGAAGACTGAACAAACGTCCTATGTGAATTGTTATGAA
AATTTAACGATAGATTATTCACAGCTTCCGTTACTATTCAAATGTCGCGCACTCGATAGT
TTGGATACTATGAAATTAAACTTGCACATCACTCAAGCGGAATTCAAATACAGCAATCTG
ACTGTGAAAATCCGTCCTGATGCAATACCAACTGAGAGTGATTTTATATTACACTGCGCT
TTCCCCGCGTCCGCCGCCGACCAGATCATTAATTTCCTACCACAGCCATCAACTACCCAT
TATATTTACATAGACGTCGTTGATGGCAACACTACTTATATCCGCGATTGTGAGTCGTAC
GCGTCGAATGAAGAAGAAGCCTTGACTATAGTTGATCTCATGAGAGATGACAAGGATAAA
TTCTTTGGCTTCGATTACGGCCTGCCCACAACCGATTTAACTGACGTCACGAGTCTGGTC
AATCTAACGTCAAATGAAATAAAAGCTCTGAGATTCAAGGTCAATCAATTCCTAGACATA
GGTGGAAGTCTTACAATAGAGGCAAGTCTGTTGATGAGCATAAAATATTACATGGGTTAC
AAGAGAGAGATAAAGAATGCAATGATGGCATTCACAGAGGATAACCAGTTCTTCAAAGTG
GTGATTTGCTTAGAGCTCAACCAGGCTGGTGTGCCGCTTGAATCTGGTAAATGTAAATAC
AATGACGTAATCAAACCGGCGTTACTAGTCCTGAACAGCACGGATTCGGATTCCATTTAC
GACAAAATTATAATACCATTCCCAGAAGGTGGTTTGTGGTACATGACGTTGAAGCTGTTC
TGCGATAGCGTGGTTTGTCCCTGTCGCACTTCAGACAACGCTACCAAGTATTATGTGAAC
ACGACAGAGATAGGACATAAGGAGACTTCTATGGATAGCTTCTCGGATATTCTAAGGCAA
GGCGTCACTGAATGCAATACAACTGTAGTCCTATCGGTGTCGTCGAAGTCATGTGTCGGT
GGTAAATGCAGCAACAATGGGAACTGTGGTTACAATACCTTCAGCGGTATAGTTATGTCG
TTTTGCGGCTGTACTTCCGGTTATGGTGGTTGGGACTGTTCAGATGATTCCAGAATAGAC
AGCCAGGCTTATTTACTTCTCTCCGTACTGCTTCTGACTTTAAGTAATTTGCTGTTCATC
TTATCGATATATGTCGCGTTTATCCGACTCTATATACTTGAAGGAGTCATGTATGGACTC
ACTATGGTATTTTCAACATTCTACCACGCGTGTGATGCGCCAGCTCAGGTCGCATATTGT
ATCATACGCGGTAATCTCCTTCAATTTGGTGATTTCTACTGTGGACTCATGTCTTTTTGG
GTAACACTGCTAGCTATGAGTATCATAGGGACTAGGTTTAGGGCGTTTTTCCAAGTCCTC
GGTGCTATATTAATCGCGTTGCTAACAACTTGGAATATGCATTCATTTGTTGCTTTTCTC
TTGCCAGTCGCGATTGGTGCTCTTATATTATTTGTTAGTTGGTATATTGATTACAAGAAA
AGTCATTTCATGAGATATCCTACCTCATATTACACTAGATACATGCCTCTTGGTCTCATT
TTAGTTTCGGTTGGCCTTATTTGCTACGCTTTCCTGCAGACGGAACAAAATTATAAAATT
GTTCACTCTTTATGGCATATGATAATTGCCCTGAGCGTTGTATTTTTATTGCCAGATTCA
AAACGTCGTAATTGCCATCCGTTTGTTGCCAGTAGAGAATATTTTAAATGGCCATTTTGT
TCTTATCACAGATCACAGAGTCCGTAA
Protein sequence:
MYRSYRTVSVVFYQVSSDINDAQFTFQSEELHLNNIGGKQVDGLLDGRSSPPPMEICNIR
VVADALPTLMVEERGKGWDKGRGRKGRENGSCSPQEVIIQIKYGSYPAVNPDGYQFPKNF
VNPANRESIQTLEMMSDGSNITYSISNPRSGIYYAMAYVKWEDPRNQKVEQEGLVANCRT
ILYTDLQVKTEQTSYVNCYENLTIDYSQLPLLFKCRALDSLDTMKLNLHITQAEFKYSNL
TVKIRPDAIPTESDFILHCAFPASAADQIINFLPQPSTTHYIYIDVVDGNTTYIRDCESY
ASNEEEALTIVDLMRDDKDKFFGFDYGLPTTDLTDVTSLVNLTSNEIKALRFKVNQFLDI
GGSLTIEASLLMSIKYYMGYKREIKNAMMAFTEDNQFFKVVICLELNQAGVPLESGKCKY
NDVIKPALLVLNSTDSDSIYDKIIIPFPEGGLWYMTLKLFCDSVVCPCRTSDNATKYYVN
TTEIGHKETSMDSFSDILRQGVTECNTTVVLSVSSKSCVGGKCSNNGNCGYNTFSGIVMS
FCGCTSGYGGWDCSDDSRIDSQAYLLLSVLLLTLSNLLFILSIYVAFIRLYILEGVMYGL
TMVFSTFYHACDAPAQVAYCIIRGNLLQFGDFYCGLMSFWVTLLAMSIIGTRFRAFFQVL
GAILIALLTTWNMHSFVAFLLPVAIGALILFVSWYIDYKKSHFMRYPTSYYTRYMPLGLI
LVSVGLICYAFLQTEQNYKIVHSLWHMIIALSVVFLLPDSKRRNCHPFVASREYFKWPFC
SYHRSQSP