| New model in OGS2.0 | DPOGS202770 |
|---|---|
| Genomic Position | scaffold30:- 21777-23961 |
| See gene structure | |
| CDS Length | 1917 |
| Paired RNAseq reads | 932 |
| Single RNAseq reads | 2681 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010493 (1e-60) |
| Best Drosophila hit | CG15141 (3e-52) |
| Best Human hit | putative E3 ubiquitin-protein ligase UBR7 isoform 2 (3e-53) |
| Best NR hit (blastp) | PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] (4e-62) |
| Best NR hit (blastx) | AGAP009512-PA [Anopheles gambiae str. PEST] (3e-66) |
| GeneOntology terms | GO:0004842 ubiquitin-protein ligase activity GO:0005515 protein binding GO:0008270 zinc ion binding |
| InterPro families | IPR011011 Zinc finger, FYVE/PHD-type IPR013032 EGF-like region, conserved site IPR013993 Zinc finger, N-recognin, metazoa IPR013083 Zinc finger, RING/FYVE/PHD-type IPR003126 Zinc finger, N-recognin |
| Orthology group | MCL14557 |
Nucleotide sequence:
ATGATGGACGTCTTGCAGGAACAAGAAAATTTTGAAGAAGATGCTAACGCTGTGTTGGGA
GGTTCCGATGATAAAAACTGTACATATTCTAAGGGCTACATAAAGAGACAAGCATTGTAC
GCCTGCATGACCTGCTGCTCTGAAGCGAAATCTGACCCAGCTAAGAGAGCAGGTCTTTGT
CTAGCCTGCAGCCTCACTTGTCATGAAAATCATGAACTTATAGAACTGTATACTAAACGC
AATTTTAGATGTGACTGCGGTAACTCAAAATTCAACTCTAATCCTTGTCAGTTAGCACCC
AAAAAAGCAAATTTTAATGAGGAGAATAGTTACAACCAGAATTTTAGTGGAGTATACTGT
GTGTGTCGGAGGCCATACCCCGATCCAGATTGTGAAACTGAAGATGTAATGATCCAATGT
ACCATATGCGAGGACTGGTACCACGGCACACATTTAGAAACAACTGTCCCTAACAGTGAA
CTCTACACAGAGATGATTTGCAAAGGATGTATGGAAAAATATGACTTTTTACATTCCTAC
AGTTACATGGTTGTAAATGTTGAAAGCTCCGATGTTGATGTCATTAATGTTCCTGAGAAT
GGAATTAAAACTCGCAATGGAGACTTCAAAACAGATGCCACAGCTGTTGAAGATAGTGAA
AGGTCTCAGGAAAATGAAGATATTAGCCTCACTCCTAAAAAAGAAATTTCTTCTATTGAT
GAAAACATTGAAGAAAATAAAAAGAAAGTAGAAAATGATGGAACAAATAATTCTAAGATG
GAAGGTATTTCTGATGTTGATGTTAGTGTTGAGAATCCTTCAAGTGAAAGTCTCATAAGT
TGTAACAATAAAGACAACACTGATATTAAAGAGGAGGGAAGCAATGCAGACAATACCAAT
GACCGAGATACTAGTAGTGACCAGAGCCAAGATATTATCAATAGTGAGATCCAACGAGAC
ATGGAACTAAACAAAAATAATACTGCAAAAGAAATCGAAGACAAAAATGCTATGAAAACA
ACTAGCGAGGTGAAAAATAGACAAGATGAAAATACAGATGAAGAGAAGCCTCTGGTAGAT
TATGAAAGTGAAAGCTGCAAGTCAAAAATGAATTTAGATATCACAGAAACAAGTCAGGAA
GATATTAAGACTACACATGAGAACGGGAAAATGTATAAAAAAAATGATGCTGACAATACT
ATCAACAGAACAAGTGAGTTAAATAACTTAGAAAAAGGAGAAGGGACAGAGGAAAAAACG
GAAAACTTGGCATCTCATGATGAAAAAGATGTGGTACAAAACACATCAAAAGGAAAGGAA
ACAAAAAATGAAGGTGGTGGTAACTGTAGCAATCCTGTTGATGGTAATTATACAGACGCT
GCTACTGATGAAGTAACAGGGGACAGCAATCACAAAGGATCAGAAAAAAGAAAACTTTCC
ACAGAAGAAACAACAGATAGTTCAGTGAGTAAGAAAAGTAAATTAGGAGAGGTGACTGAC
AAACCATGCACTTGTCCTAAAAATGACAAAAAAGTGTACAGAGGAGCAACATTCTGGCCC
TCAACCTTCCGCCAGAGACTCTGCACATGCAATGAATGTCTGAGCATGTATAAGGACCTG
TCTGTTATGTTCCTTATGGACACTGAAGACACAGTCGTCGCCTACGAGAGCTTGGGCAAG
GAGAAAACCAACGGTAAGCCATCACAGTATGAAAAGGGGCTCCAAGCACTTTCATCGCTG
GATAGAATCCAACAGATCAATGCCTTGACAGAGTACAACAAAATGAGAGACAAGCTATTA
GACTTCCTTAAAAGCTTCAAGGACAGGAAAGAAATTGTCAAGGAGGAAGACATCAAAGCA
TTCTTTGCCGGAATGAAGCCCAAGAGGGAACCAGAGGGTGTGTACTTTTGTCGGTGA
Protein sequence:
MMDVLQEQENFEEDANAVLGGSDDKNCTYSKGYIKRQALYACMTCCSEAKSDPAKRAGLC
LACSLTCHENHELIELYTKRNFRCDCGNSKFNSNPCQLAPKKANFNEENSYNQNFSGVYC
VCRRPYPDPDCETEDVMIQCTICEDWYHGTHLETTVPNSELYTEMICKGCMEKYDFLHSY
SYMVVNVESSDVDVINVPENGIKTRNGDFKTDATAVEDSERSQENEDISLTPKKEISSID
ENIEENKKKVENDGTNNSKMEGISDVDVSVENPSSESLISCNNKDNTDIKEEGSNADNTN
DRDTSSDQSQDIINSEIQRDMELNKNNTAKEIEDKNAMKTTSEVKNRQDENTDEEKPLVD
YESESCKSKMNLDITETSQEDIKTTHENGKMYKKNDADNTINRTSELNNLEKGEGTEEKT
ENLASHDEKDVVQNTSKGKETKNEGGGNCSNPVDGNYTDAATDEVTGDSNHKGSEKRKLS
TEETTDSSVSKKSKLGEVTDKPCTCPKNDKKVYRGATFWPSTFRQRLCTCNECLSMYKDL
SVMFLMDTEDTVVAYESLGKEKTNGKPSQYEKGLQALSSLDRIQQINALTEYNKMRDKLL
DFLKSFKDRKEIVKEEDIKAFFAGMKPKREPEGVYFCR