| New model in OGS2.0 | DPOGS202847 |
|---|---|
| Genomic Position | scaffold30:+ 6191-10271 |
| See gene structure | |
| CDS Length | 3000 |
| Paired RNAseq reads | 1798 |
| Single RNAseq reads | 4781 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008825 (2e-17) |
| Best Drosophila hit | Transportin-Serine/Arginine rich (2e-143) |
| Best Human hit | transportin-3 isoform 1 (7e-148) |
| Best NR hit (blastp) | PREDICTED: similar to transportin [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to transportin [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0005488 binding GO:0005575 cellular_component GO:0008150 biological_process |
| InterPro families | IPR013598 Exportin-1/Importin-beta-like IPR016024 Armadillo-type fold IPR011989 Armadillo-like helical |
| Orthology group | MCL14079 |
Nucleotide sequence:
ATGGATTCGCCTTCAATGGAAACTATTTATCAGGCCATCAGTGCCTTGTATGATAACCCT
AATACATCAGAAAAAGAAAAGGCTTCACTTTGGTTGGGAGACGTTCAAAAATCGATACAC
TCATGGAAAATAGCAGATCAACTGTTGCAGCAGAAAAAAGACGTAAAATCATGTTATTTT
GCGGCGCAGACGATGAGATCAAAAGTACAACACAGTCTGTCAGAGCTGCCACAGGAGGCT
CAGATTTCCCTGAGGGATTCTCTCATCAGTCATTTGGAAGGCATATCCTCGGACGTCACT
CCTGCTATCCTCACTCAACTGTCCCTAGCCCTGGCTGACTTGGCGCTGCAACTTACATCT
TGGCAAAATTGTGTCCATGATCTTATTAAACTGTTCTCAAGTAAAAATGAATTTGCATTA
TTAGAAGTATTGACAGTCCTACCTCAGGAAACCGACTCGTCCAGTCTGAAACTTGGTGAG
AACAGACGGGAAGAAATCAAACAAGAGCTGCGAGCAAATTCACAAATAGTATCATTTTTT
CTTAAAGAGTGTATTAATAATTCCCAAAGTTCTCATGTGGCATTAAAAATAGTGAAGTGT
ATGACATCCTGGATACAAGCGGGAGCCATGAACATCCAAGAAGTGCCGCAGAATGCAGTC
ATAGGCTTCAGCTTACAAGTGTTAAAAGACCACAATTCTATAAACATTTTACATGATGCA
GCGTCGGACTGTGTGTGTGCTATACTGCATTGTTTAGAGAACAGTACTTGTGATGATGAT
GTTACAAAATTGTTATTTGATAGTGTGGCCTCCCTAGAGGAAAGTTATCATATGGCCGTA
GCTCAGGAGGAAGAGGAAAAGGCAGCTAACTATGCCAGAATGTTTACGGAGCTGGCGGAG
ACATTCTTACATGTTATAATTATCAATACGTACAATGGCACTCCGCACTATGCTATGAGG
GCTTTGGAGCTAGCTCTGACCTGTGTTGGCCATCATGACTACGAAGTAGCGGAGATCACA
TTCAATCTCTGGATTTGTTTAGCGGAGGAGATCTATGACAAAAACTACCAACCCTTCACA
GATGTCTTCAAACCTCATATCGAGAGGCTCATTGAGGCTTTAGCGAGACACTGTCAGTAT
GAACCTGATCTCACACAGTTGCCACAAGAAGGGGACGAGTTTTATGAATTCCGAGTGAAA
GTGTTCGAGTTGATCAAAGATGTAGTATTTATAGTGGGCTCTAGCTCAGTGTTCAGAAAG
ATGTTCGGAGTGCTTCAGGCCGACCTGCCCTGGGAACAGACCGAGGCTGCACTCTTCATA
ATGCAGGCTGTTGGGAAAAATATACTACCCGAGGAGTACGAGTATGTACCGAAGGTAGTG
GAGGCGATCTTGTCGATGCCGGATAGCGCGCACGAAGCGGTCCGCCGCACTTGTCTGGCG
CTGCTGGGCGAGCTGTGCGAGTGGGTCCAGCGACACCCCGCCTGTCTGCCCGCGTGTCTG
GACGCTCTGCTACGCGCCCTGCCCCGGCCCGCCCTGGCCCCCGCCGCCGCCGCCGCTCTG
CAGAGCATATGCCGTGCGTGTCGCTCCGACGCCGCCCAGCACTGCGGTCAGCTGCTGACG
GCCGTGCGTCGGGCCGACGAGCTGCAGCTCCCGCCGCCCGCCGCCGCCACGCTACTGCGC
GCCCTGGCCGCAGCGGTCGGCCGCCTACCGCCGTATCGACTTGCGGAAGCCATGAGCGAA
GCCACGGCCGTCCAGCTGGCCGGCCTCGTCCGCCTGCTGGAGGCTCCCTCGACGGAAGTC
CGAAAGGGAACCACCGCCGACCCCATGCTGTGGCTGGACCGACTGGCGGCGCTGTTCCGG
GACGTAGACGTGGCCACGCCGCCCTCCGAGCCGCATCCCTGTCTGCCCGCCTTCAAGGAA
GCCTGGCCCGTCGTGCACAGGATCATGAACAAATACGTGACGGAGTGGCGCGTCATGGAG
CGTTCGTGTCGCTGCGTGCGGTTCATGGTTCGATGTACCGGGAAGCATGCGGTGGAGATG
CTGGACGAGCTGGCGAGGGCTCTGCCCGTGCTGTACGCGAGGTGTCCCCACTCGTGCCTG
CTGTACCTGGCGGCCGTCATTACGGACACGCTGGCGGACGACGGCCCGGCCACCTCCGCC
TCCCTCACCCGCCTCTTGCACGACCTGCTACCCCGGGCAGTCACCCTCCTCACGGCGCCC
GGCGGGCTCAAGGACAACCCGGACACAGTGGACGATCTGTTCCGACTCTGCGTTCGATAT
CTGCAACGCTGCCCGGCAGCGCTGGTGGGCGGTGGAGGAGGAGGCGAGGGCGGCGCGCTC
GTGGGCGTGCTGCAACTGGCGTCCGCGGCCTGCTCCCTCGACCACCGCGACGCGAACGGC
ACTGTCATGAAGTTCCTTCTGGAGGTGGTGCGCACGGCCAACGCGGCCAGAAACAAGGGC
GAAGCGGAGAGGAGCCCCGTGCAAGCGGCGGCGGTGAGCGCGGTGAGTGCTCTGGGCGAG
TCGTTGACGTACGCGCTGTTGGAGGCTTCGGCGCTCCACCTGCACGCCTACATGCTTGGG
GACGTGGCGGAGGTGCTGCTGCAGCTGCTGTCGTGGCAGCGCGCCCCCACCGGGGCCGCG
GAGAGCGACTGGCTCCGATCTAGTTTGCTGCGTTTGCCGCGCCGACCTCCCGCGCCCACG
GACATTCAGTGTGCGCAATTCCATCAGTACGCGCTCAGGGCCGAGAAGTGCAAGGAGATG
ACTCGAACGTCGGAACTCTTGTACTCGTCGGAGTACTTCGTTTTTCATGTGCTTTGTCAC
ATACTGTTCACCGAGTCTCTGGATGTCTATGTTTATCTGAAGGCGCTCACCTGCGGGTGT
GCGCGGCCGTACGAGAACTCGTCTCTTCAAATGAACGTCACCCCTCAGAGATCGCTCGGA
AGCAAGAAACGAATTAGCGAGTCTCGCTGGAGTGACGGCGCGGCTCCTGCTACAGCTTGA
Protein sequence:
MDSPSMETIYQAISALYDNPNTSEKEKASLWLGDVQKSIHSWKIADQLLQQKKDVKSCYF
AAQTMRSKVQHSLSELPQEAQISLRDSLISHLEGISSDVTPAILTQLSLALADLALQLTS
WQNCVHDLIKLFSSKNEFALLEVLTVLPQETDSSSLKLGENRREEIKQELRANSQIVSFF
LKECINNSQSSHVALKIVKCMTSWIQAGAMNIQEVPQNAVIGFSLQVLKDHNSINILHDA
ASDCVCAILHCLENSTCDDDVTKLLFDSVASLEESYHMAVAQEEEEKAANYARMFTELAE
TFLHVIIINTYNGTPHYAMRALELALTCVGHHDYEVAEITFNLWICLAEEIYDKNYQPFT
DVFKPHIERLIEALARHCQYEPDLTQLPQEGDEFYEFRVKVFELIKDVVFIVGSSSVFRK
MFGVLQADLPWEQTEAALFIMQAVGKNILPEEYEYVPKVVEAILSMPDSAHEAVRRTCLA
LLGELCEWVQRHPACLPACLDALLRALPRPALAPAAAAALQSICRACRSDAAQHCGQLLT
AVRRADELQLPPPAAATLLRALAAAVGRLPPYRLAEAMSEATAVQLAGLVRLLEAPSTEV
RKGTTADPMLWLDRLAALFRDVDVATPPSEPHPCLPAFKEAWPVVHRIMNKYVTEWRVME
RSCRCVRFMVRCTGKHAVEMLDELARALPVLYARCPHSCLLYLAAVITDTLADDGPATSA
SLTRLLHDLLPRAVTLLTAPGGLKDNPDTVDDLFRLCVRYLQRCPAALVGGGGGGEGGAL
VGVLQLASAACSLDHRDANGTVMKFLLEVVRTANAARNKGEAERSPVQAAAVSAVSALGE
SLTYALLEASALHLHAYMLGDVAEVLLQLLSWQRAPTGAAESDWLRSSLLRLPRRPPAPT
DIQCAQFHQYALRAEKCKEMTRTSELLYSSEYFVFHVLCHILFTESLDVYVYLKALTCGC
ARPYENSSLQMNVTPQRSLGSKKRISESRWSDGAAPATA