| New model in OGS2.0 | DPOGS202858 |
|---|---|
| Genomic Position | scaffold30:+ 118802-121456 |
| See gene structure | |
| CDS Length | 1920 |
| Paired RNAseq reads | 545 |
| Single RNAseq reads | 1620 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010298 (7e-30) |
| Best Drosophila hit | lethal-(2)-denticleless (2e-109) |
| Best Human hit | denticleless protein homolog (3e-59) |
| Best NR hit (blastp) | GA10897 [Drosophila pseudoobscura pseudoobscura] (2e-120) |
| Best NR hit (blastx) | GA10897 [Drosophila pseudoobscura pseudoobscura] (8e-114) |
| GeneOntology terms | GO:0005737 cytoplasm |
| InterPro families | IPR019781 WD40 repeat, subgroup IPR011046 WD40 repeat-like-containing domain IPR015943 WD40/YVTN repeat-like-containing domain IPR001680 WD40 repeat IPR019782 WD40 repeat 2 IPR017986 WD40-repeat-containing domain IPR019775 WD40 repeat, conserved site |
| Orthology group | MCL12541 |
Nucleotide sequence:
ATGAATGATGTTCAGATTATAATTGATCGTCAATTGGGGAATTATTCTCGCTTTAATTAT
GACAATGTTTTGAGAAGATTAGTAGTGAATAGTGAGGAATCATTCTACGGGCTGCAGAGC
GCGTCTTTACCAGCTACTTTTGAACAGGATCCTCCAATATTCGCGTGCAGATTCTCTGAA
GCTCCTGGCTACGATCACATTGTTGCTCTTGCTAATGAGGATGGACGAGTCGCTATACAG
AACACAAGTACTCCAAAGGCCGCCAGTAAATTGGAGGGGTTCCAATGTCATAACAATGCA
GTGTTTGACCTGGTGTGGAGGCCACAACACATGAACTTTGTTACTGTTTCAGGAGACCAC
ACCGCTTGTTTATGGGATGTGAGCGAGGCGGGTCCGCGGCGCGTGCTCGTGTTTGCGAGT
CACACTCGCTCCGTTAAGACGGCAGCCTTCCGTCCGAGCGAGCCGTGCGTGTTCGCAACC
GGGGCGCGGGACGGACGCGTGCTGCTCACCCCCGCCGCCGCCGTGCTGCGACCCGACGAC
GTGCTGGCCGCCGTGCACGCCGCCCCGTCCCCTCGCCACCGCCGGCCTCGTCCCGAGCGC
GCCGCCAGCGTCACTGGCCTCGCTTTCCGCGACGACCGCACGCTCGTCTCCTGCGGCGAG
TGCGATGGCAATATTAAGGTCTGGGACCTCCGCAAGAGCTACGGCGCCTACCGACGCGAG
CCGCTACCCATGCACTCCATCCCCTACTGCGGGAGCTCAGCGCGCAACGGATACACGAAC
TTGATCGTAGACGAGGCCGGCGTGCGGCTGTACGCGAGCTGCATGGACGACGTCATCTAC
TGCTTCAACGTGTCCACGTTCAACGCGCTGCCGGAGCGCCGCTACGTCGGACACGAGAAC
AGCACCTTCTACATCAAAACGGGTCTCTCCCCCGACGGCCGCTACCTCGTGAGCGGCTCC
AGCGACAAGCACGCCTACGTGTGGAACGTACGTCGATCCCAGCCGGTGGCGCGGCTTGCG
GGCCACCGCGCCGAGGTGACCTGCGCCGCCTGGGGGCGCGCGCCCGACTGCCGGCTCGTC
ACCTGCAGCGACGACGCCCGCCACATGATCTGGCGGGTCGGCCGCGAGGAGCGCCACGAC
GGAGACGACTGCGCCGGCCGAGCCGAGCGACCGCCCAGCGACCAGCAGGACGCGCCGCTG
TGGGGAGCGCTGGAGAGGACGCCTGCATCTTTGAGGAGAGCCCCGGCGGCGCCCGGCTCG
GCCGGTGCGGACCGCGTTCGACACAAGGCGTCCAAGCGCTGTCTGGCCGAGCTCATGGGC
GCTGCGCGGGAACGAGACGAAGACGGTGCCGGCAAGAGGCCGCGGACCGAAGAACCGCGA
ACCGTGGACCTGAAGAGGCGGGCGGAGTGTGGCGAGGATGGTCCGCCTTCCAAGAAGGAA
CGTGCGGAGTCCGAAGCGCCGCCCGCGGACTGGGCATACTTCTCCCCTAAGGCGGGTTCG
TCCTTCATGACACCGACTAAAAACTACGACAAGAGAACTTGTAAGACTCTCTCCCCGAAG
AGTCCCAACTCTGCGTCTCCTCCCCAGGTGTTGTTGAAGACTCCCAGCAAGGATTCACCT
CACAAACTCAGAATCGTCAGTTTCTCGACTCCCACCAAAAACTTACCCGACTTCGTGATG
GACGGAGAGGCGCCGCACCTCCGCCTCATGTCTCCGGGGAAGAAGAAGGCCGAGACCACG
GACTGGCTGACCAGGATAGTTAGGGAGAGAAGGGGCAAGGAGAATCACGACAAGGTCGCC
GCACCGCCCAGCCCCAAGGACGCACCGCCGCGGAGGAACTCGCTCACCGACAAGACTCCC
CGGCCGACCCCCAGGACTAGAACGTTACTCAAATACTTCTCCGTCACCAGAAAGGAGTAG
Protein sequence:
MNDVQIIIDRQLGNYSRFNYDNVLRRLVVNSEESFYGLQSASLPATFEQDPPIFACRFSE
APGYDHIVALANEDGRVAIQNTSTPKAASKLEGFQCHNNAVFDLVWRPQHMNFVTVSGDH
TACLWDVSEAGPRRVLVFASHTRSVKTAAFRPSEPCVFATGARDGRVLLTPAAAVLRPDD
VLAAVHAAPSPRHRRPRPERAASVTGLAFRDDRTLVSCGECDGNIKVWDLRKSYGAYRRE
PLPMHSIPYCGSSARNGYTNLIVDEAGVRLYASCMDDVIYCFNVSTFNALPERRYVGHEN
STFYIKTGLSPDGRYLVSGSSDKHAYVWNVRRSQPVARLAGHRAEVTCAAWGRAPDCRLV
TCSDDARHMIWRVGREERHDGDDCAGRAERPPSDQQDAPLWGALERTPASLRRAPAAPGS
AGADRVRHKASKRCLAELMGAARERDEDGAGKRPRTEEPRTVDLKRRAECGEDGPPSKKE
RAESEAPPADWAYFSPKAGSSFMTPTKNYDKRTCKTLSPKSPNSASPPQVLLKTPSKDSP
HKLRIVSFSTPTKNLPDFVMDGEAPHLRLMSPGKKKAETTDWLTRIVRERRGKENHDKVA
APPSPKDAPPRRNSLTDKTPRPTPRTRTLLKYFSVTRKE