| New model in OGS2.0 | DPOGS201708 |
|---|---|
| Genomic Position | scaffold448:- 35455-37562 |
| See gene structure | |
| CDS Length | 708 |
| Paired RNAseq reads | 1443 |
| Single RNAseq reads | 5727 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010756 (3e-08) |
| Best Drosophila hit | CG1240 (2e-29) |
| Best Human hit | ND |
| Best NR hit (blastp) | PREDICTED: similar to conserved hypothetical protein [Tribolium castaneum] (1e-44) |
| Best NR hit (blastx) | GE20337 [Drosophila yakuba] (2e-26) |
| GeneOntology terms | GO:0000500 RNA polymerase I upstream activating factor complex GO:0000182 rDNA binding GO:0006360 transcription from RNA polymerase I promoter GO:0045449 regulation of transcription GO:0003701 RNA polymerase I transcription factor activity GO:0006364 rRNA processing GO:0005634 nucleus GO:0006350 transcription GO:0005730 nucleolus |
| InterPro families | IPR003121 SWIB/MDM2 domain IPR014876 DEK, C-terminal IPR019835 SWIB domain |
| Orthology group | MCL17992 |
Nucleotide sequence:
ATGGCAGATGTTAGTAAAGAAGATCTTGAAAGGGAAATCGAAAAGATCCTTAAAAATGCT
AACCTCGCAAACACATCCACGAAAAAGGTCATACAAAAGTTGGAGAAAGTGTTTGACACA
GATTTGTCGGAGAAGAAGAAGGTTATTGACCAACTGGTGATGGACTATGTGAACAGTAAG
AACTCTGAAGATGAATACGATGAAGAGGATGATGATGAGGAAGAAGAAGAAGAAAAAAAG
CCTGCAAAGCGTAGTGCGCCTGCTAGCAAGGCCAGTAACAAGAAATCACGAAAAGATAGT
TCCGATGAAGACGATGATGCTTCAGGAGACAGCGAGTCAGAGGAAGAGAAGAAACCAGCT
CCTAAGAAGGGTAAGAAGAAGAAGGGATCCTCAGATTCAGACAGTGATTGGGGCAAGAAG
AAAGAAAAGGCAGCCAAACCGAAAAAGGGTGGTGGGCGGAAAGGCGGAGGATACACCAGA
GCTTACAAGTTGTCTCCGGCCCTATCAGAACTCATGGGGGAAACGGAAATGCCGCGACAT
GAAGTGGTCAAACGTGTTTGGACCATCATCAAAGAAAAGAATCTGTACGATCCCAATAAC
AAACAGTTTGCTATCTGTGACGACGCGCTGTACAAAGTGATAGGAACCAAACGTTTCCGG
ACCTTTGGCATGATGAAGTATCTCAAAACGCATTTCCTCGATGACTAA
Protein sequence:
MADVSKEDLEREIEKILKNANLANTSTKKVIQKLEKVFDTDLSEKKKVIDQLVMDYVNSK
NSEDEYDEEDDDEEEEEEKKPAKRSAPASKASNKKSRKDSSDEDDDASGDSESEEEKKPA
PKKGKKKKGSSDSDSDWGKKKEKAAKPKKGGGRKGGGYTRAYKLSPALSELMGETEMPRH
EVVKRVWTIIKEKNLYDPNNKQFAICDDALYKVIGTKRFRTFGMMKYLKTHFLDD