New model in OGS2.0 | DPOGS201687  |
---|---|
Genomic Position | scaffold448:+ 10452-10945 |
See gene structure | |
CDS Length | 408 |
Paired RNAseq reads   | 233 |
Single RNAseq reads   | 835 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA010789 (2e-46) |
Best Drosophila hit   | mitochondrial ribosomal protein S18C (1e-32) |
Best Human hit | 28S ribosomal protein S18c, mitochondrial precursor (9e-27) |
Best NR hit (blastp)   | mitochondrial 28S ribosomal protein S18c [Bombyx mori] (1e-47) |
Best NR hit (blastx)   | mitochondrial 28S ribosomal protein S18c [Bombyx mori] (9e-48) |
GeneOntology terms    | GO:0005763 mitochondrial small ribosomal subunit GO:0006412 translation GO:0003735 structural constituent of ribosome |
InterPro families   | IPR001648 Ribosomal protein S18 |
Orthology group | MCL14781 |
Nucleotide sequence:
ATGGCTTCATTACAAGTAGCTATACGACATTTGTTGTCCACATCAAGACGAGCGGTAATT
TCAACAATAAGGCCGTATTCTCAAGCAGTGGTAGAAAATGATGACGCCCCAATCGAAATG
GAAAATCCATATAAGAAGGAACGCAAACAATGTATTCTTTGCAAGCTGAATATAAGACCT
GATTACAAGAACTACAGACTGCTATCACAGTTCCAGAGCCCTTACACGGGCAGAATATAC
GGAAGACATATAACCGGGTTGTGTAAAGCGAAGCAGGCCTTAGTGGATTCTGAGATAACG
AAAGCTCAAAACAGCGGCTATATGCCTTACTATTACAAAGACAAGGCATTCCTGAAAGAC
CCAAAGCTCTTTGATCCCGAAAACCCCATTCGTTTCCATAGATTTTAA
Protein sequence:
MASLQVAIRHLLSTSRRAVISTIRPYSQAVVENDDAPIEMENPYKKERKQCILCKLNIRP
DYKNYRLLSQFQSPYTGRIYGRHITGLCKAKQALVDSEITKAQNSGYMPYYYKDKAFLKD
PKLFDPENPIRFHRF