| New model in OGS2.0 | DPOGS201690 |
|---|---|
| Genomic Position | scaffold448:+ 38170-43542 |
| See gene structure | |
| CDS Length | 2997 |
| Paired RNAseq reads | 1263 |
| Single RNAseq reads | 3014 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010792 (3e-120) |
| Best Drosophila hit | lethal (3) 07882 (4e-72) |
| Best Human hit | nucleolar protein 14 (6e-42) |
| Best NR hit (blastp) | PREDICTED: similar to lethal (3) 07882 CG5824-PA [Apis mellifera] (5e-91) |
| Best NR hit (blastx) | PREDICTED: similar to lethal (3) 07882 CG5824-PA [Apis mellifera] (2e-91) |
| GeneOntology terms | GO:0042274 ribosomal small subunit biogenesis GO:0030490 maturation of SSU-rRNA GO:0005730 nucleolus GO:0030515 snoRNA binding GO:0006364 rRNA processing GO:0005515 protein binding |
| InterPro families | IPR007276 Nop14-like protein |
| Orthology group | MCL13973 |
Nucleotide sequence:
ATGGCTAAAGTTAAGAATAAGAGGAATGCAGGTTTAGCGGATAAAGTGCATCAGAAGCGA
AATGCAGACGCAAATAAAAAGAAGTTGAACCCCTTCGAAGTTCATATAAATAGGGAGAAA
CTTAAAGTTTTAGGAAAGAAATCTAAGCATGATCGAGGTTTACCAGGTGTATCTCGTGCC
AAGGCCATACAAAAGAGAAAGGAGACTTTAGGAACAGAAATGAAGATAATGCATAAAACC
AATGCTTTCATAGACCGTCGTATTGGTGAAAGAAACAGTCAGCTCTCAGCGGAAGAACGC
ATGATAGCTAGATTTGCTGCAGAGAGATCTAAGCAACATAGTAAAAAGAGTATTTATAAC
TTGGCCGACGATGAGATATTGACGCACAGAGGTCAGACATTGGAACAGATTGAAAAGTTC
GATGATCCGAGATCATCTGATGATGAAGAAGAAGAAAAAAAGTTCGGAGGTTTAGACGAT
GAGTTTGTATCAGAAGGACATTTTGGTGGTGGTGTGCTATCAAAATCGGAATCGAAAGAC
GGTGCGAAGTCGCATAAAGATCTGATAGAACAACTAATTGCGGACTCAAAGAAGAGGAAA
GCGGAGAAGCAGAAGGAGAAGGAACAGACTTTAGATTTAACAGAGAAATTGGATAGCGAA
TGGAAAGATTTGCAACCTGTTGTTTTTAAGCAGCACAAAGAAGAATCCATTATAGACAAA
CTGTTGAATAAAGAAGATAAAGGCTTGGACTATGATAAGACTATGAGGGAACTGAGATTC
GAGAAGAGAGGGACGCCATCAGATGCTCTTAAGAGCAAGGAAAAGTTGGAGGAAGAGGAA
AAGAAGAAAATTGAAGAATTAGAGAAGCAAAGACAAGAGAGAATGTTATCACAAGAAGAG
AAGGCGCCAAAGAGAACACAGACTATAAAACACAGGTCCGCAGACGATTTGGACGACAAC
TTCGATCTAGACGACAACAAGGAATTCATGTTGGCTTATGATAAGGATGGGAAACCATTA
GTACCTGAAAATATACTGAACGATTTCTCAGTACCGAATGCTAGGAAGAAATTCGATGAC
GGTATATCGGACACGTCTGATGAGGATGATGATGAGAATGATGAGAACAATGACACTGAT
GATGGAAATGATGAAGATAATGAAAATGATGAAAATGATCAAGATAATGAAGATGATGAT
AGTGAAATAGAGCATGATGAAGCAAAGGAAGGTCAAAGTCTGAAAAGACCAGCGTCTCCA
GAATCCAGTGATAGTGAAAGCAATGAAGATAGTAAGAAACAGAAACTTGATGATGAGGTT
TTGCCTAAAAAGATAACCCGGATTGATAATAACTCTCATAACGACGATATAGAAAGTTCA
AATGACGAGAGGACTCAGGGACTATTGAACGAAAACAATATGTCTGAATCAAATGACTTA
GAATGTGATACTTCTAGTGACGATGAACCGGGTATTGTTAGAGACAAGAAAATAAGTAAC
GCTGAGAGTGAAAGTGGAAAACTAAGTGACGGTACGTTGAAAGTGGATTCCGATGATGAT
AATGATGATGATGATGATGATGATGGTGATGATGATGATGATGATGACGAAGAAAGTATG
CAGAACGACAAGAACAGCAAACTTGATTTAGATGATCTGAAAGAGACAGATGAATCGGAG
GAAGAGAGCGAGGAAAACAAAGAGAAAATGGGTTCCTTCTTTGATCTCAAATCGGCAGTG
GGTGATAATTTGAAGGAACTATTGCGTGGGAAGACACCGTCCCAACACTCCTCGGCCCTA
CAGAAGTTAATAAAGAGCTATGATCCCAGCTTATCACAAAACAATAAAGAGCTGCTGAGC
ACATTATTCGCTCACCTCTTGCAGTATATACACGATCTGTTCAGCGACCTCTCCGAAGAG
AGCGACGTTATAAAGTCTTTTCTGATCTTCGACAAAATAGTCCCTTATCTCTACGATTTA
GTTCATTTAAATAAAGTTTCAACAAAAAAATTTTTGGTCGAATTACTTAAAGAAAAACAT
GACAATTTTAAACTTTCCCCCAAAAAAGTACCTGATTTGAATACGCTAATATTTTTCAAA
TTAGTATCCATTCTGTATCCGACATCCGACTTCCGGCATCCCGTTACGACGCCATCTTTG
ATTTTCATGACCGAAATATTAACTTTATCGCGTTTCAGAGACTCGATTTCAGTGTCTAGG
GGTTTGTTTATAGTTTCGTTAATTCTAGAGTATACTTGTTTATCAAAGCGGTACGTTCCG
TCGGCGTTAAATTTCTTAAGAGGCTTAATTTATTTGAGCGCGAACACGTCTATTCTGAAT
CCAGTGCAAGTCGTTCCGCCATTCCGTTTGAATAGAGACGTCAAGATTTTGAAATTGGAA
CGCGACTGTTCCAAAATGGCTGTAGACAACAAAATGGCCGCCAGGGACTTAATAGCCAGT
GAGGTAGACGATAGTTTCAGAATACGCTGTCTATCGACAGCGGCTATGATGCTGAAGGAA
TTCTTTGATAATTATAACGACATAGAAGCTCAAGAGGCGATATTCGAACAACACATCCAG
ATACTGGGTCGAGTGGATTTAGAACTATATCCGGATAGAGTGTCGCATAAGGTTACGGAG
ATAGTGCGGTACATGAAGCAATGCCTGGAAGTGAAGACCTACACACACATGGCCAGAGAG
AAGGTCCGGCCCAAGGCTCTCAGGCTCTATGAACCTGATATACAGGCTGTCTTCACAGGT
AGCAAGAGTTCTAAAATGTCCAAGGAGGGCGCTGAACGAGCTAGACTACAAGGGAAATAC
AAGAAGGAGATGAAGGGAGCTCTCAGAGAGATAAGAAGAGATAAGGCTTACATAGCCTCC
GTCAAGATCCGCCAGAAAATACAAAGTGACAACATCCGCAAAGAGAAAGTGAAGCAAATC
TACAAGGACGCGTCCATACAGCAAGGGGAGCTGAATAAATTAAAACGAATGAAATAA
Protein sequence:
MAKVKNKRNAGLADKVHQKRNADANKKKLNPFEVHINREKLKVLGKKSKHDRGLPGVSRA
KAIQKRKETLGTEMKIMHKTNAFIDRRIGERNSQLSAEERMIARFAAERSKQHSKKSIYN
LADDEILTHRGQTLEQIEKFDDPRSSDDEEEEKKFGGLDDEFVSEGHFGGGVLSKSESKD
GAKSHKDLIEQLIADSKKRKAEKQKEKEQTLDLTEKLDSEWKDLQPVVFKQHKEESIIDK
LLNKEDKGLDYDKTMRELRFEKRGTPSDALKSKEKLEEEEKKKIEELEKQRQERMLSQEE
KAPKRTQTIKHRSADDLDDNFDLDDNKEFMLAYDKDGKPLVPENILNDFSVPNARKKFDD
GISDTSDEDDDENDENNDTDDGNDEDNENDENDQDNEDDDSEIEHDEAKEGQSLKRPASP
ESSDSESNEDSKKQKLDDEVLPKKITRIDNNSHNDDIESSNDERTQGLLNENNMSESNDL
ECDTSSDDEPGIVRDKKISNAESESGKLSDGTLKVDSDDDNDDDDDDDGDDDDDDDEESM
QNDKNSKLDLDDLKETDESEEESEENKEKMGSFFDLKSAVGDNLKELLRGKTPSQHSSAL
QKLIKSYDPSLSQNNKELLSTLFAHLLQYIHDLFSDLSEESDVIKSFLIFDKIVPYLYDL
VHLNKVSTKKFLVELLKEKHDNFKLSPKKVPDLNTLIFFKLVSILYPTSDFRHPVTTPSL
IFMTEILTLSRFRDSISVSRGLFIVSLILEYTCLSKRYVPSALNFLRGLIYLSANTSILN
PVQVVPPFRLNRDVKILKLERDCSKMAVDNKMAARDLIASEVDDSFRIRCLSTAAMMLKE
FFDNYNDIEAQEAIFEQHIQILGRVDLELYPDRVSHKVTEIVRYMKQCLEVKTYTHMARE
KVRPKALRLYEPDIQAVFTGSKSSKMSKEGAERARLQGKYKKEMKGALREIRRDKAYIAS
VKIRQKIQSDNIRKEKVKQIYKDASIQQGELNKLKRMK