| New model in OGS2.0 | DPOGS202927 |
|---|---|
| Genomic Position | scaffold2456:+ 3562-5555 |
| See gene structure | |
| CDS Length | 807 |
| Paired RNAseq reads | 109 |
| Single RNAseq reads | 441 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001916 (3e-115) |
| Best Drosophila hit | Use1 (5e-36) |
| Best Human hit | vesicle transport protein USE1 (9e-38) |
| Best NR hit (blastp) | embryonic development factor [Bombyx mori] (5e-129) |
| Best NR hit (blastx) | embryonic development factor [Bombyx mori] (6e-122) |
| GeneOntology terms | GO:0005515 protein binding GO:0005783 endoplasmic reticulum GO:0007041 lysosomal transport GO:0030163 protein catabolic process GO:0032940 secretion by cell GO:0005764 lysosome GO:0006888 ER to Golgi vesicle-mediated transport |
| InterPro families | IPR019150 Vesicle transport protein, Use1 |
| Orthology group | MCL15643 |
Nucleotide sequence:
ATGGCAGTGCAGCAAGAAAAGCAGAACAATGTTACTGTGGCAAAAAAATCTAGATTAGAA
ATGAATATTCGACAACTTCTAAATAAATGTGAATTAATTGCCAAACAAGAACCAATCGAT
AGTAACTGCAGGCTAAAACACTATGTAGAATCATTAAATGAAATGTTAACTGAGATAAAA
ACAAGCCCTGATAAGCCACCGAAAGATCTTCTAGCTGAATACTCAAAGAGAGCAGCTTTT
TTGAAGGGACTTATTCAAACAGCTTCACTTAACAGTCCTATAGAAAAGCTAGAAGCAGTT
CAACAGCTTTCTCATGGAGCAGCAACAATGTCAACAGACAGTCCAGCTCAAGAAATACAT
CAGAAAACAGTCGCTAAATATGGAGTTGAATTGAGATCGGAGCTCTTTGGTCTCGAAGAC
AACAATGACACACTAAGACAGCGGAATATAATAAAGGCAGCAAATTTCACCAGCAACAGC
ACAAGTCAAGAGGATATTGACTCCTTACTGAAATACCACCAGAATATGCAGGAGAAAGTT
GCCGAAAACATGGTCATGCTTACCAAAAGTTTAAAAGAACAATCTCAAATCGCCAGCACT
ATTATTAAAGGTGATACAGAGGCTCTAAAGAAATCTTCAGACTTGACAGACAGGAACCTG
TCCTCGCTGAAGGTGGAGTCAGATCGGCTTCAGGAACACAGTCGGAGTGCTTGGAAATGC
TGGTTATGGATTATGCTTGCCGTTGTTATGGTCATATTCATCAATATGGTGCTGTTCATG
AAAGTGATGAAGAAACGAAAGTATTGA
Protein sequence:
MAVQQEKQNNVTVAKKSRLEMNIRQLLNKCELIAKQEPIDSNCRLKHYVESLNEMLTEIK
TSPDKPPKDLLAEYSKRAAFLKGLIQTASLNSPIEKLEAVQQLSHGAATMSTDSPAQEIH
QKTVAKYGVELRSELFGLEDNNDTLRQRNIIKAANFTSNSTSQEDIDSLLKYHQNMQEKV
AENMVMLTKSLKEQSQIASTIIKGDTEALKKSSDLTDRNLSSLKVESDRLQEHSRSAWKC
WLWIMLAVVMVIFINMVLFMKVMKKRKY