| New model in OGS2.0 | DPOGS204153 |
|---|---|
| Genomic Position | scaffold119:- 160492-162618 |
| See gene structure | |
| CDS Length | 2127 |
| Paired RNAseq reads | 2835 |
| Single RNAseq reads | 9537 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005035 (0.0) |
| Best Drosophila hit | neurochondrin (0.0) |
| Best Human hit | neurochondrin isoform 2 (2e-57) |
| Best NR hit (blastp) | conserved hypothetical protein [Culex quinquefasciatus] (0.0) |
| Best NR hit (blastx) | conserved hypothetical protein [Culex quinquefasciatus] (0.0) |
| GeneOntology terms | GO:0003674 molecular_function GO:0008150 biological_process GO:0005575 cellular_component |
| InterPro families | IPR008709 Neurochondrin |
| Orthology group | MCL12520 |
Nucleotide sequence:
ATGGTGACGAAACTAGTGAAAAGCAAAGATTGTAATTCTACAGCGAAGAAAGCTTTGTTT
GAAGCAATAGGTTTCAAATTCTTAAAGAAGTTGTTAACTGGAACCAATGTGCAAGATGAT
TGTCCGCCGTCTGTTTATAAATCCGTCGCACTGTCTATTCTTACAAATTTCTGTAATGAA
CCTGAGCTTTCTTCACATCCTGAAATGCTTGCAAATATACCAGTTTTTCTAGATATAGTA
CAAACATCAGACAATGAAGATTATGATGATAACCTCATTATCATAAGTGAAGCATACACA
TGCTTACAATGCATTGCAGAACATGAAGCTGGTCAAAAGGCTCTAATAGAAGTTGGTGCC
ATTACTAAAATGTCTGAAATTTATTCTCACCAAAGTTTTCAAACTGACGAAGCTCTTAAT
ATTCTCGTCAAATTAGTAAGTCGTTATGGCCCTGCTGCATGGGGTAATGATCCCAAGCCC
TTTCACTCTTTAGTCAATAAAATTGCTCTTGACTTTGCAACTGATCAATCTGAAAGGAAA
TTTGAACTAGCTACCATACTCAGTGCTCTATTATATAGTTGTAATAAGTCAACGGTTGTA
CCAGGTTTTGCCGATGAAACCTGGCACTTGAGTATATATAAAGCCCTATATGATATTTTA
ACAAGTAAAATAGGTAAGAATCAAAGAGACCCAGCTTTGAAATTAGCAGCCAACATTATT
GATTTACTTGGAGTTGAATGGACATTCAACGATGAAGAAAATCCAAAAAAATTCTTCCTG
TTACTATTGCAACTGTGTGCTATTGAAGTAAGGATGCAGTTGGAAGATAGAAGCTTTAAA
CAAGCATTTGCAAATGCTGAACTCGTTACAGCCTGTTTCATTGTGTTAGAATCTTCAATT
AACTATATGGGTACAGATCAACTAGATTTAGAACAAAAAGAGAAACAATCTGTGTACACC
AGTCTCAAGGGAGCATTTAATGCTGTTGTATCTATTTTAACAAAAGTCTCAAATGACAAA
AACAAAGATAAGCTTCCTGATGCTGAGAAAGTTTTCATCTGTGCTATGGTCAGAGTTTTA
GTTGCATGGATTGCTCAAGAAACTACTGCAATGAGAGAACAGATTTATGCACTATTACCA
TATATTTTTACCCTTGCAAATGATTCCTTCCATGCTCATCGATCCAGAAAAATGGCTGAG
AAGACCAAAACTGAAGGTGAGCCTATGGATATGGACATATCTTTATTGGGTCAAATAGAT
TTACTACGCTTAATGTTACCAGCTTTGTGCCATCTTGTTGTTGAAGATAAAGCTAGAGAT
ATAGTACTTAACCTTAAAGAGGAAGATATTCTATATGAAGCTATGAATTTCCATTGGTCA
ATTGTTCATTATAAGAAACCACCCATCCCAAAGTCAGAAAGAGGAAAAGCAAGGACACAA
CCAGAACCTGAATTAGATCCAAAAGTTTTGGAAGACATGAAGGATTCAAGAGCTGCAATG
GTCAGCCTTTGCAATATTTTTATGAACTTGACAGTTTTGGCTCCTAAAGTTGTTGAAAAC
AGTATGTTATTTAACACTTTACTTAAATTTATTTTTAACAATTTACCAGAATTAAAAAAT
ATACCTGACAACCTTGTACTTCATGGCCATCTAGCTGTGCTAGGTTTACTTTTGTTAAAA
CAACAGGCTAGCAAAGTGAAAAAGAATGATTTTTCAATATGCAGATACATACAATCAACA
ATCCGATTCCTCTGGGATGCATACAATGTTGATGAGTCCAATGATCCTAATGAACTTGTT
GTGTCAATGACCTATAAGGAACATTGGAATGAAATAGCTGATTTGTGGTTCTTGGGAATG
CAAACTTTAAGTGGAGTCTTGCAGACAATCCCTTGGATCTCTGAATTTGCTATAGAGAGT
GGATGGGCTCAAGGAATAGCCGAAATGCTCGTAAAAGTCAAAGTTGGTACTTTACCCCCC
AATGTTAAGTCAGCATTTGAAGATTTTCTTTGCAGGCTTGTTGACTCGAATGAAGGTGCT
ATTCCTGTCTTGAAAAAGGGTGGTGCTTTGAAAATGTGCAGAAACCATAGATTAATGGAT
TTGGGCAAAAAACTCTTCGGAGATTAA
Protein sequence:
MVTKLVKSKDCNSTAKKALFEAIGFKFLKKLLTGTNVQDDCPPSVYKSVALSILTNFCNE
PELSSHPEMLANIPVFLDIVQTSDNEDYDDNLIIISEAYTCLQCIAEHEAGQKALIEVGA
ITKMSEIYSHQSFQTDEALNILVKLVSRYGPAAWGNDPKPFHSLVNKIALDFATDQSERK
FELATILSALLYSCNKSTVVPGFADETWHLSIYKALYDILTSKIGKNQRDPALKLAANII
DLLGVEWTFNDEENPKKFFLLLLQLCAIEVRMQLEDRSFKQAFANAELVTACFIVLESSI
NYMGTDQLDLEQKEKQSVYTSLKGAFNAVVSILTKVSNDKNKDKLPDAEKVFICAMVRVL
VAWIAQETTAMREQIYALLPYIFTLANDSFHAHRSRKMAEKTKTEGEPMDMDISLLGQID
LLRLMLPALCHLVVEDKARDIVLNLKEEDILYEAMNFHWSIVHYKKPPIPKSERGKARTQ
PEPELDPKVLEDMKDSRAAMVSLCNIFMNLTVLAPKVVENSMLFNTLLKFIFNNLPELKN
IPDNLVLHGHLAVLGLLLLKQQASKVKKNDFSICRYIQSTIRFLWDAYNVDESNDPNELV
VSMTYKEHWNEIADLWFLGMQTLSGVLQTIPWISEFAIESGWAQGIAEMLVKVKVGTLPP
NVKSAFEDFLCRLVDSNEGAIPVLKKGGALKMCRNHRLMDLGKKLFGD