| New model in OGS2.0 | DPOGS204200 |
|---|---|
| Genomic Position | scaffold119:+ 90906-97567 |
| See gene structure | |
| CDS Length | 1761 |
| Paired RNAseq reads | 673 |
| Single RNAseq reads | 1767 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005158 (0.0) |
| Best Drosophila hit | DNA polymerase alpha 73kD (8e-67) |
| Best Human hit | DNA polymerase alpha subunit B (7e-72) |
| Best NR hit (blastp) | DNA-directed DNA polymerase alpha 2 [Xenopus (Silurana) tropicalis] (8e-83) |
| Best NR hit (blastx) | polymerase (DNA directed) alpha 2 [synthetic construct] (3e-84) |
| GeneOntology terms | GO:0000060 protein import into nucleus, translocation GO:0006260 DNA replication GO:0005515 protein binding GO:0005634 nucleus GO:0005654 nucleoplasm GO:0003887 DNA-directed DNA polymerase activity GO:0005658 alpha DNA polymerase:primase complex GO:0046982 protein heterodimerization activity GO:0003674 molecular_function GO:0003677 DNA binding |
| InterPro families | IPR007185 DNA polymerase alpha/epsilon, subunit B IPR013627 DNA polymerase alpha, subunit B N-terminal IPR016722 DNA polymerase alpha, subunit B |
| Orthology group | MCL12238 |
Nucleotide sequence:
ATGGCTACCGAAGAATTGGTGACCGAGCAATTTAAATTTTTAGGAATAGAAGTATCAAAA
GAAGTTTTATCAAAATGTGTGAGTATATGCACAGAATACGATGTAGACGCTGAAACTTTC
ATCGAACAATGGATGGCGTTTAGTTTGACTACTTTAAACGGTGCTTCGCCGACTTTAGAT
AACTTAGAATTACTTGAGAAGAGGGAATTTTCCAAACGGTCTGCGAGTCGACTCACCGCT
GTCGCTAATGAAGTTACACATTCAAGTACCGGCAGAAGTTTGACTGTTTACGGAGCGCCT
GTTGCTAAACAGTCAGAAAATGAACTTCTGTCTAATTACATGACAACTACACCAAAGAGA
ATTAAAATAGAATGTGAGACGGGGCCGAAACAGAATGAGCTCCATCCTGCTACATATTCA
CCGAAAGTAGAGCACTCCGTTAAATACACATCGAGAACGAACCAAGGGACAGTGGTGCAT
TCATTCGGTGAAGATAAGCTGGTGGAAGTGATCACGAATACAACGGCCTTGGATAATTTA
CTCGAACTAAATATTGTACAAGTCCCCAACGACGACGGCGAACTATACAACAAAGCGAAG
TACGGCTTTGAACTGCTGCATGAAAAAGCGAGTGTATTTGATAACCACATCCGATATATA
TCACAATGTATCATGAAGAAGAACGGCTTTTCCGAGACGGTCTCGGTGAGGCATAAAACA
CAGACCGAAGTTTTGGTAGCTGGTCGTATTGAATGCGACGCAGATGCTAGACTAAACTCG
AAAAGTGTAATCTTACAAGGCACATGGGAGGATTCACTGAGCCAGACCGTCCCTCTAGAT
TTGGACAGCGTGCAGCAGTATTCTCTGTTCCCGGGCCAGGTGGTGGTGGTGCGTGGTATA
AATCCACGCGGCAACAAGTTTGTGGCTCGGGAGTTGTTCTGCGACGCGGCCCGCCCTGTG
CCGGATCCAACATCAGATATCACGAACACGCTAAAAGGTACATTGTCAATGGTTGTAGCG
GCCGGCCCGTACACCACGTCTAATAACATGTCGTACGAGCCGTTGAAGGACTTCATAGCG
TATTTGAACACTCACAAACCACACGTAGTCATAATGACGGGACCATTCGTGGACTGTGAG
CACGAGAAAGTCAAAGATAACTCTATGGCTGAAACATATAAATCTTTCTTCGACAAACTT
ATTGATAGTCTAGCTGATATCGGCAACACAAGTCCTTTTACAAAAATTTACATAGTGTCA
AGTCACAAGGACGCTTTTCATGTAAATATCTACCCGACGCCGCCCTATAGCAGTCGAAAG
AAATATCCCAACATACAATTTCTACCAGATCCCAGCACATTAAACATCAATGGATATATA
GTTGGCATCACCAGTTACGATGTGCTTATGAGCATCAATCAAGAAGAAATATCACATGGT
TCAGTCGGCGACAAGTTATCTCGTCTGTCCGGGCACGTGTTGCGGCAACAGTGCTATTAT
CCAACGGCTGGCTCTCTCGGCTCGCTGGCGGCGGACGGATCGCTGTGGGCGGCGCACGCA
CAACTACCCGCAACTCCTCACATACTAGTAGTGCCCTCCAACTTCAGATACTTCGTTAAG
GAAGTGAACGGCTGTATAGTCATAAACCCTGAGCATCTCAGTAAAGGTGCCGGTGGCGGG
ACGTTCGCACGACTCGTCGTTCGTCCGCCGACAGAAGATAAAACTAATAGTAATATAGCC
GCACAGATAGTACGCATTTAA
Protein sequence:
MATEELVTEQFKFLGIEVSKEVLSKCVSICTEYDVDAETFIEQWMAFSLTTLNGASPTLD
NLELLEKREFSKRSASRLTAVANEVTHSSTGRSLTVYGAPVAKQSENELLSNYMTTTPKR
IKIECETGPKQNELHPATYSPKVEHSVKYTSRTNQGTVVHSFGEDKLVEVITNTTALDNL
LELNIVQVPNDDGELYNKAKYGFELLHEKASVFDNHIRYISQCIMKKNGFSETVSVRHKT
QTEVLVAGRIECDADARLNSKSVILQGTWEDSLSQTVPLDLDSVQQYSLFPGQVVVVRGI
NPRGNKFVARELFCDAARPVPDPTSDITNTLKGTLSMVVAAGPYTTSNNMSYEPLKDFIA
YLNTHKPHVVIMTGPFVDCEHEKVKDNSMAETYKSFFDKLIDSLADIGNTSPFTKIYIVS
SHKDAFHVNIYPTPPYSSRKKYPNIQFLPDPSTLNINGYIVGITSYDVLMSINQEEISHG
SVGDKLSRLSGHVLRQQCYYPTAGSLGSLAADGSLWAAHAQLPATPHILVVPSNFRYFVK
EVNGCIVINPEHLSKGAGGGTFARLVVRPPTEDKTNSNIAAQIVRI