DPGLEAN09160 in OGS1.0

New model in OGS2.0DPOGS204201 
Genomic Positionscaffold119:+ 110260-110762
See gene structure
CDS Length324
Paired RNAseq reads  12
Single RNAseq reads  650
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA005159 (6e-36)
Best Drosophila hit  Srp14, isoform B (1e-17)
Best Human hitsignal recognition particle 14 kDa protein (4e-23)
Best NR hit (blastp)  signal recognition particle 14 kDa protein-like protein [Bombyx mori] (5e-39)
Best NR hit (blastx)  signal recognition particle 14 kDa protein-like protein [Bombyx mori] (2e-36)
GeneOntology terms





  
GO:0048500 signal recognition particle
GO:0006614 SRP-dependent cotranslational protein targeting to membrane
GO:0008312 7S RNA binding
GO:0030942 endoplasmic reticulum signal peptide binding
GO:0005515 protein binding
GO:0045900 negative regulation of translational elongation
GO:0005786 signal recognition particle, endoplasmic reticulum targeting
InterPro families
  
IPR003210 Signal recognition particle, SRP14 subunit
IPR009018 Signal recognition particle, SRP9/SRP14 subunit
Orthology groupMCL14430

Nucleotide sequence:

ATGGTCTTATTAGGAAATGATGAGTTTTTGATTGAACTTTCAAAGTTATTTCAAAAAGCT
AGGGCATCAGGTTCTATCTCTATGACTATGAAAAGATATGATGGGAGGACTAAGCCTGTA
TCTCGAGATGGAACACCTGCTATCAAAGACCCACAGTATAAATGCCTTGTTAGAGCTCAA
TCAGGAAGCAAGAAAATTTCAACTGTTATTGAACAGCGGGATGTTGAAAAATTTACAATG
GCATACTCTAATCTTCTTAAAACTAGTGTAAATGGTTTAAAACGTTTAAAGAAGCCTAAG
AAGAAGGCAATAGCAGCAAATTAA

Protein sequence:

MVLLGNDEFLIELSKLFQKARASGSISMTMKRYDGRTKPVSRDGTPAIKDPQYKCLVRAQ
SGSKKISTVIEQRDVEKFTMAYSNLLKTSVNGLKRLKKPKKKAIAAN