New model in OGS2.0 | DPOGS204201  |
---|---|
Genomic Position | scaffold119:+ 110260-110762 |
See gene structure | |
CDS Length | 324 |
Paired RNAseq reads   | 12 |
Single RNAseq reads   | 650 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA005159 (6e-36) |
Best Drosophila hit   | Srp14, isoform B (1e-17) |
Best Human hit | signal recognition particle 14 kDa protein (4e-23) |
Best NR hit (blastp)   | signal recognition particle 14 kDa protein-like protein [Bombyx mori] (5e-39) |
Best NR hit (blastx)   | signal recognition particle 14 kDa protein-like protein [Bombyx mori] (2e-36) |
GeneOntology terms    | GO:0048500 signal recognition particle GO:0006614 SRP-dependent cotranslational protein targeting to membrane GO:0008312 7S RNA binding GO:0030942 endoplasmic reticulum signal peptide binding GO:0005515 protein binding GO:0045900 negative regulation of translational elongation GO:0005786 signal recognition particle, endoplasmic reticulum targeting |
InterPro families    | IPR003210 Signal recognition particle, SRP14 subunit IPR009018 Signal recognition particle, SRP9/SRP14 subunit |
Orthology group | MCL14430 |
Nucleotide sequence:
ATGGTCTTATTAGGAAATGATGAGTTTTTGATTGAACTTTCAAAGTTATTTCAAAAAGCT
AGGGCATCAGGTTCTATCTCTATGACTATGAAAAGATATGATGGGAGGACTAAGCCTGTA
TCTCGAGATGGAACACCTGCTATCAAAGACCCACAGTATAAATGCCTTGTTAGAGCTCAA
TCAGGAAGCAAGAAAATTTCAACTGTTATTGAACAGCGGGATGTTGAAAAATTTACAATG
GCATACTCTAATCTTCTTAAAACTAGTGTAAATGGTTTAAAACGTTTAAAGAAGCCTAAG
AAGAAGGCAATAGCAGCAAATTAA
Protein sequence:
MVLLGNDEFLIELSKLFQKARASGSISMTMKRYDGRTKPVSRDGTPAIKDPQYKCLVRAQ
SGSKKISTVIEQRDVEKFTMAYSNLLKTSVNGLKRLKKPKKKAIAAN