| New model in OGS2.0 | DPOGS210404 |
|---|---|
| Genomic Position | scaffold5764:+ 222-3028 |
| See gene structure | |
| CDS Length | 1182 |
| Paired RNAseq reads | 146 |
| Single RNAseq reads | 505 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006931 (9e-20) |
| Best Drosophila hit | DNA polymerase alpha 50kD (4e-80) |
| Best Human hit | DNA primase small subunit (2e-79) |
| Best NR hit (blastp) | PREDICTED: similar to DNA primase [Nasonia vitripennis] (9e-97) |
| Best NR hit (blastx) | PREDICTED: similar to DNA primase [Nasonia vitripennis] (7e-95) |
| GeneOntology terms | GO:0005658 alpha DNA polymerase:primase complex GO:0006260 DNA replication GO:0003887 DNA-directed DNA polymerase activity GO:0006269 DNA replication, synthesis of RNA primer GO:0003896 DNA primase activity |
| InterPro families | IPR014052 DNA primase, small subunit, eukaryotic/archaeal IPR002755 DNA primase, small subunit |
| Orthology group | MCL12939 |
Nucleotide sequence:
GTTGGACAACATGATGAGAACCTACTGCCGGAGATGTTACCTGTGTATTATACAAGATTA
TTTCCTCAGAATATATTTTGTAGATGGCTTGCTTGTGGCAGTAGCCCTCAGCCTCTATCT
AACAGAGAGTTATCATTTACACTTGCTGATGATATATACTTACGGTATCTTTCTATTAAC
AATCAAAAAGAATTCCAAACACTATTACAAAAGAAGTGCCCTCATAAATTAGACATTGGC
GCTGTCTACAACACAAAGCCATCCATTGGGCGCCATGATGCAGTTGTGCTGTCCAGGGAA
CTTGTGTTCGATATTGATCTTACAGATTATGATGAAGTACGAACTTGTTGTCAGGAGGCC
AAAGTTTGTAACAAATGCTGGAAATTTATTGTGGTAGCATGTGAAATTATTAACGCTGCT
CTGAAAGATGATTTTGGTTTCCAGAATATTCTTTGGGTTTTCTCTGGTAGAAGAGGTTGT
CATTGTTGGGTATCAGACTATGAAGCAAGAACACTAGATAGTCCTGGTCGTGCTGCTATT
GCTGATTACCTTTGCCTTATTTTTGGAGGGGAAAATAAAAATAAGAAAGTACATCTTGGA
AGTGATAACTTGCACTCTAGTATAAAGAGGTCTCTTAATATTATTGATAGATATTTCCTT
GAAATACTAGAAGATCAAGATTTTTTGTCAACTTCGGAGGGCACAAAAAAATTTCTAAAA
ATAATACCAGATGACACCTTACGTAAACAAGTTGAAGATAGCTTCGGAAGAGGATTGTCT
ACTGTTGACAAATGGGAATGTTTCATACAAACTTACTATCAGTTCTGTAAAGAGAATATT
AACGCTATCAGAAAAATGAAATACCTAGTCGAAGAAATTAAAATACAATATTGTTATCCA
AGATTAGATGTGAATGTTACAAAGGGCTTTAACCATTTACTTAAATCTCCATTTAGTATA
CATCCTAAGACTGGTAAAGTATCCATAGTATTCAAACCAGAAAATGCCCGAAACATGAAA
TTAGAAGATATACCAACCATTTACAGCCTTCTAGATGATAACTCTCCAGATAAAATTCAA
CATCAAAATAATATGAGAACAGCTGTTAAAAATTTTCAAGAAGTGGTCTTCTCACTGGAG
AAAACTGAAGCATTGAGAAGAAGGAATGAAGCTAGTAAGTAG
Protein sequence:
VGQHDENLLPEMLPVYYTRLFPQNIFCRWLACGSSPQPLSNRELSFTLADDIYLRYLSIN
NQKEFQTLLQKKCPHKLDIGAVYNTKPSIGRHDAVVLSRELVFDIDLTDYDEVRTCCQEA
KVCNKCWKFIVVACEIINAALKDDFGFQNILWVFSGRRGCHCWVSDYEARTLDSPGRAAI
ADYLCLIFGGENKNKKVHLGSDNLHSSIKRSLNIIDRYFLEILEDQDFLSTSEGTKKFLK
IIPDDTLRKQVEDSFGRGLSTVDKWECFIQTYYQFCKENINAIRKMKYLVEEIKIQYCYP
RLDVNVTKGFNHLLKSPFSIHPKTGKVSIVFKPENARNMKLEDIPTIYSLLDDNSPDKIQ
HQNNMRTAVKNFQEVVFSLEKTEALRRRNEASK