| New model in OGS2.0 | DPOGS205115 |
|---|---|
| Genomic Position | scaffold817:- 15457-18474 |
| See gene structure | |
| CDS Length | 867 |
| Paired RNAseq reads | 1073 |
| Single RNAseq reads | 3285 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005897 (6e-119) |
| Best Drosophila hit | spermidine synthase, isoform A (4e-90) |
| Best Human hit | spermidine synthase (5e-87) |
| Best NR hit (blastp) | PREDICTED: similar to spermidine synthase [Apis mellifera] (7e-109) |
| Best NR hit (blastx) | GI23961 [Drosophila mojavensis] (2e-97) |
| GeneOntology terms | GO:0004766 spermidine synthase activity GO:0008295 spermidine biosynthetic process GO:0005575 cellular_component |
| InterPro families | IPR001045 Spermine synthase |
| Orthology group | MCL14581 |
Nucleotide sequence:
ATGGATGTTATAAAGAAGAATTGGTTTTCCGAGTCATGTGAAATGTGGCCAGGGAGCACC
TTCTCATTTGAGGTTAAGAAGTTGCTTCACAAGGAACGGTCTCCATTTCAAGAGATACAG
GTGTTTGATTCAACCAGCCTCGGAAGAGTGCTTGTACTAGATGGTATTATACAATGTACA
CAGAAAGATGAATATTCATACCAGGAAATGATATCGTTCCTACCGTTGTGCTGTCATAGA
AATCCAGAAAAAGTGTTGATAGTTGGTGGAGGGGATGGCGGAGTTGCCAGGGACGTTGCG
AAGCATCCAAATGTTAAAGAAATTGTACAAGTCGAAATAGACGCTAAGGTGATAGAGGTT
TCGAAGAAGTACCTGCCCTTCATGGCTGTAGGTTTCGACAGCAAAAAATTGACATTGCAC
GTTGGTGATGGATTTGAATTCATGAAGAATCATAGTCATGAATTCGACGTCATTATAACG
GATAGCAGCGACCCCATCGGGCCCGCCGTCAGTCTTTTCCAAGAAAATTACTTCTCGCTG
ATGAAGAGCGCCCTCAAACCCAACGGCATCGTCTGCTCACAAGCTGGCACATACTGGGAC
AATATGGATTTGGTGAAAAATACATTAAATATCTGCAAGAATCAATTCCCCTCCGCCGCA
TACGCAATAACATCGGTGCCAACGTACCCGTCCGGGTCGATCGGTTTCGTTATTGGTTCA
TTGGAGGAAAACGTCAAATTTGACAATCCAGTTAGAGAGTTTACGCGCGAACAATTGAAT
GACATGGACCTGAAGTATTACAACACTGACATCCATAAAGCCGCATTTGCATTACCCAAT
TTCGTCAAGAACGTAATCGACGCTTGA
Protein sequence:
MDVIKKNWFSESCEMWPGSTFSFEVKKLLHKERSPFQEIQVFDSTSLGRVLVLDGIIQCT
QKDEYSYQEMISFLPLCCHRNPEKVLIVGGGDGGVARDVAKHPNVKEIVQVEIDAKVIEV
SKKYLPFMAVGFDSKKLTLHVGDGFEFMKNHSHEFDVIITDSSDPIGPAVSLFQENYFSL
MKSALKPNGIVCSQAGTYWDNMDLVKNTLNICKNQFPSAAYAITSVPTYPSGSIGFVIGS
LEENVKFDNPVREFTREQLNDMDLKYYNTDIHKAAFALPNFVKNVIDA