New model in OGS2.0 | DPOGS204602  |
---|---|
Genomic Position | scaffold4677:- 4056-8399 |
See gene structure | |
CDS Length | 1575 |
Paired RNAseq reads   | 660 |
Single RNAseq reads   | 1594 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA001812 (5e-07) |
Best Drosophila hit   | CG6034 (6e-29) |
Best Human hit | spermine oxidase isoform 1 (5e-13) |
Best NR hit (blastp)   | PREDICTED: similar to amine oxidase [Nasonia vitripennis] (8e-36) |
Best NR hit (blastx)   | peroxisomal N1-acetyl-spermine/spermidine oxidase [Culex quinquefasciatus] (7e-35) |
GeneOntology terms    | GO:0005737 cytoplasm GO:0005634 nucleus GO:0055114 oxidation reduction GO:0046208 spermine catabolic process GO:0046592 polyamine oxidase activity GO:0016491 oxidoreductase activity |
InterPro families   | IPR002937 Amine oxidase |
Orthology group | MCL18136 |
Nucleotide sequence:
ATGGAGGAGCGAGTCGTGCTGGTCCTGTCTCTGCTGACGCTACATCATGTTAGCAGCCAC
GTAACAATGTCCCGATATGACACCATAGTTATCGGTCTGGGATCTGCGGGAGCCACAGCG
GCATCGACACTGGCTAAGGCCGGCAAGAGAGTGTTGGCGTTAGAGGCCCAGGACAGGGTC
GGAGGGAGAGTCCACACAGTGCAGTTCGGAGATGGTGTGGTGGAACTTGGAGCAGAATGG
CTCCACGGCACGCATCCGAGTATTGTATACGAGGACGTCCAAAGGAACAACATCAGTTTA
GTGCCGCAGGAGTTCTATCTCATGACCTATAAATCGGATGGAACGAGAGGGAATGACGTG
GTCATCAACGAACTGGAGGAGTTGTGTTTTGATGATACCATAAACCTAGCAGGTCCGAAC
ATGCCCGCTGGCTTCAACATCACGCAGAAAATTCAAGCACACATCAAAGAAAACTATCCC
GAGTTGGAAAACGATCGCGAATTCATGGACGAGGTTATGCCATTTTTGAACCTGGTTGTC
AATAACCACGAGTCGTCTAACGACTGGAACGACGTCAGCTCTCGATCTAGATACACGGAG
CTTGACGGACCACAATATCTAAGTTGGCATAAACAGGGATATCACTCGTTCTTTGACATA
TTGCTGAACAAATACAATAACGGTCCGGGCTGGCCGACGTTAGACGTAAAACTGAACACA
GAAGTCACTTTAATAAAATGGCCGAAGGATTCGACTGGGGACGTGGAAGTCAAGTGTGTG
GACGGCAGCGAGTATAAAGCTGATAATGTCATAGTTACGGTATCGGTGGGAGTTTTGAAG
GACAGAAAGACCTTAAGGTTCCAGCCAGAACTGCCGCCGGAGAAGATAAAAGCAATAAAT
GTCATACCGATAGGAGTTATGAACAAAATTATTCTGAAGTTCGAAAAACTAGATCTGCCT
CGCGGAGTCTTCTATGGGTTTCTGTGGAAATCTGAGGACAGAGCTCGCGTGAGCGTCGAA
GATCGTTGGACCACTCAGATTTTCGGAGTCAGCACACCCACGGGCACTTCAAATACTATA
ACGCTTTGGACAAGTGGTACAATTGGACTATTGATAAGTGGGAGTGAAGGAGTAGAAAAG
GAGATCGAAAAGAGGACAAGCGGGGTAACTGCTTTTGAGTTTGGATGTAATCAGAGCCTT
AAAATGAGCTTTGCCAGCTCTGACGGTGAGATTAGTAGTGGACTGCGTCAGATAACCACT
CGTGACGCGGAAGCCGATAGCAAACCGGAAGAAATTCTTGGTCTTTCCAAGTCTAGAGTA
ACAAACAGTATACCAGTGCCAAAACGAGGGAGAGGTCGCTCACCCACCACTGGGGTGTAC
GTGGGAAATGCAAGGGCGAGGAATGAGCTCGCCGAAGCCAATCGGGCATCAATGGAGCTG
CCTACACAAGCAGAGGTCTCTGATTTCAGCCAAAATAGACGGCTCGAAAGAAAGAAAGTC
ATTTCATTTTTTGTTACTGTTTCCGACTGTGGTTTGCGAGGTAATAGTTACATAAACATT
AACACGTTTCCATAG
Protein sequence:
MEERVVLVLSLLTLHHVSSHVTMSRYDTIVIGLGSAGATAASTLAKAGKRVLALEAQDRV
GGRVHTVQFGDGVVELGAEWLHGTHPSIVYEDVQRNNISLVPQEFYLMTYKSDGTRGNDV
VINELEELCFDDTINLAGPNMPAGFNITQKIQAHIKENYPELENDREFMDEVMPFLNLVV
NNHESSNDWNDVSSRSRYTELDGPQYLSWHKQGYHSFFDILLNKYNNGPGWPTLDVKLNT
EVTLIKWPKDSTGDVEVKCVDGSEYKADNVIVTVSVGVLKDRKTLRFQPELPPEKIKAIN
VIPIGVMNKIILKFEKLDLPRGVFYGFLWKSEDRARVSVEDRWTTQIFGVSTPTGTSNTI
TLWTSGTIGLLISGSEGVEKEIEKRTSGVTAFEFGCNQSLKMSFASSDGEISSGLRQITT
RDAEADSKPEEILGLSKSRVTNSIPVPKRGRGRSPTTGVYVGNARARNELAEANRASMEL
PTQAEVSDFSQNRRLERKKVISFFVTVSDCGLRGNSYININTFP