New model in OGS2.0 | DPOGS213876  |
---|---|
Genomic Position | scaffold1473:- 22256-28189 |
See gene structure | |
CDS Length | 1359 |
Paired RNAseq reads   | 44 |
Single RNAseq reads   | 523 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA013429 (2e-109) |
Best Drosophila hit   | CG31272 (7e-59) |
Best Human hit | synaptic vesicle glycoprotein 2C (2e-16) |
Best NR hit (blastp)   | PREDICTED: similar to synaptic vesicle protein [Tribolium castaneum] (2e-76) |
Best NR hit (blastx)   | PREDICTED: similar to synaptic vesicle protein [Tribolium castaneum] (3e-67) |
GeneOntology terms    | GO:0030672 synaptic vesicle membrane GO:0006810 transport GO:0005215 transporter activity GO:0055085 transmembrane transport GO:0006629 lipid metabolic process GO:0016298 lipase activity |
InterPro families    | IPR020846 Major facilitator superfamily IPR016196 Major facilitator superfamily, general substrate transporter IPR005828 General substrate transporter |
Orthology group | MCL22701 |
Nucleotide sequence:
ATGGTGTGGGGATACGTCTCCGACACCCTGGGGAGGAGGAGTATCCTGGTGTGGGGGTGT
CTCAGCAGCGGCCTGGTGGAGGTCGTGGCTGCCATCAGCCAGAGCTTCACCATGCTTCTT
GTGATGAGATTCGCTAGCGGGTTTTTATTCAACGGTCCCTTCGCAGTGCTAATCTCTTAC
CTCGCTGAGCTCCACCGAGCTGACATCCGAGCTCGTGTCATTCTCCTCTCCAGTTTCTTC
TTCACCCTGGCCAACACCACCCTCCCGCTACTGGCGTGGGCTATTATCACCCAAGACTGG
GAATTCACACTTTTCGGAGGTGGAATGGTCCTCCATTCGTGGAACATATTCCTGTTGGCC
ACGGCGATGGTGCCATTACTGACGGGACTGGCAGCCGTCTGCTTGCCAGAGAGTCCCAAG
TTCCTCATGTCGAGAGGTCGCAACGATGAAGCTTTAGTAATATTGAAAAAAATATACTCC
TGGAACACTGGCAGGCCACCCGAGACCTACCCGATAACTCGCCTAGCTCAAGAGAAACAT
CCACAACGTGGTCGCGGACTGGAGGCGCTCCAGGGCGGCGTGGCCCAGCTCTCGCCGTTG
TTTCGTCGACCGCATGCCGCTTGGTTGCTGCTGATATGCGTCGCACACGTGTGCTGCATG
TTCGGAGCCAACACTGTTCGTCTGTGGTATCCGCAACTGGCAGCCATGATAGGCTCCGAG
GGTAACGCCAGCCTCTGCTCCGCCATCGCCCCGCAGCCGCCCGCGGACGAGGTCACAGAC
TGCACGCCCATAGAGACGGACATGCTCACCTACCTGCAGAACGCGGTGGTGGGAGCTGGA
TCTGTGCTCACTTACGGAATAGGAGGCATGCTCATCAATCGCTGTGGCAAGAAGATGGTG
GCGGGTGTGTGTGGGGTGATGGGCGCTGTGTTCGTGGGCCTGCTGCCTCTCGTCGGCAGC
AGTTCGTTCCCAGTGGTCGCCATAGTGACCACGGCCCTAGCCCTCACCGCCTTGTGCTCC
GCCTCCCTCTCCAGCATTGCTGTAGACTTGTTCCCCACATCATTGAGGGTGATGGCGATG
GCCGTGTTCCTCATGTCGGGTCGCATGGGCACCATATCTGGAACCATCGTCTTCCCCATA
CTCATAGACTTCGGTTGCCTACCTCCTTTCCTGACCATAGCTGCTGCTCTAATGGGCACA
GTGTCACTACCATCTAACAGGACTCACTCCACCCACAGATCTCATACTCTTACTCTACAA
CAAATACAAATGCTCCTCGCACAGCCTCCGCGCCTGACTCCCTCGACCCCATCTCATCCC
TCCTCTATACGATGCCTCAGTATTTGTACAAAAAATTAA
Protein sequence:
MVWGYVSDTLGRRSILVWGCLSSGLVEVVAAISQSFTMLLVMRFASGFLFNGPFAVLISY
LAELHRADIRARVILLSSFFFTLANTTLPLLAWAIITQDWEFTLFGGGMVLHSWNIFLLA
TAMVPLLTGLAAVCLPESPKFLMSRGRNDEALVILKKIYSWNTGRPPETYPITRLAQEKH
PQRGRGLEALQGGVAQLSPLFRRPHAAWLLLICVAHVCCMFGANTVRLWYPQLAAMIGSE
GNASLCSAIAPQPPADEVTDCTPIETDMLTYLQNAVVGAGSVLTYGIGGMLINRCGKKMV
AGVCGVMGAVFVGLLPLVGSSSFPVVAIVTTALALTALCSASLSSIAVDLFPTSLRVMAM
AVFLMSGRMGTISGTIVFPILIDFGCLPPFLTIAAALMGTVSLPSNRTHSTHRSHTLTLQ
QIQMLLAQPPRLTPSTPSHPSSIRCLSICTKN