| Genomic Position | scaffold1473:+ 1772-21763 |
|---|---|
| See gene structure | |
| CDS Length | 1248 |
| Paired RNAseq reads | 306 |
| Single RNAseq reads | 1577 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013476 (4e-13) |
| Best Drosophila hit | daughters against dpp, isoform B (4e-37) |
| Best Human hit | mothers against decapentaplegic homolog 6 isoform 1 (6e-42) |
| Best NR hit (blastp) | PREDICTED: similar to Mothers against decapentaplegic homolog 6 (SMAD 6) (Mothers against DPP homolog 6) (Smad6) (hSMAD6), partial [Apis mellifera] (7e-54) |
| Best NR hit (blastx) | PREDICTED: similar to Mothers against decapentaplegic homolog 6 (SMAD 6) (Mothers against DPP homolog 6) (Smad6) (hSMAD6), partial [Apis mellifera] (1e-48) |
| GeneOntology terms | GO:0005634 nucleus GO:0003700 sequence-specific DNA binding transcription factor activity GO:0005622 intracellular GO:0006355 regulation of transcription, DNA-dependent GO:0005667 transcription factor complex GO:0005515 protein binding GO:0007179 transforming growth factor beta receptor signaling pathway |
| InterPro families | IPR013019 MAD homology, MH1 IPR001132 SMAD domain, Dwarfin-type IPR008984 SMAD/FHA domain IPR017855 SMAD domain-like IPR013790 Dwarfin IPR003619 MAD homology 1, Dwarfin-type |
| Orthology group | MCL15996 |
Nucleotide sequence:
ATGTGTAGAGAAGCGAACGTCGCGCCGGCGCCGAGACCGGCCCGACTCTCTGCCGACACC
TCACACAGCCGCTACAACAGCGATGTTTTTGCTGCAACGCCGTCCGCCGCCATGTCGACG
GCCGCCGCTCGCCGCCCGCGCCGCCGGCCGCGTCTCACAGGCGTCTTACGTCTAGTCTCG
ACTCTCGCCGGGGTGACGCCCGACGGCCCGGCGACGGAGCCGCGACGACACGGCGACGAC
GCGACGACGACGCGACGACGGTCAACGGATGCCAATCTCATGCAGGCTCAGTCGGAGGAC
AGTGTGTCGCGTGTGTCGATGGCGCCGCACGCACACACGTGCGCGCACCTGACGCCGCCG
GTGGCGCCAGACGACCCCCCCGTCCCCCTGACCCCCGGACACCTCCTCGCCCGCCGCCCC
GCCGCCCCGCTCCACACCGGACGGGGTTGCCAGCCGGAGGAGCGCTGCGCTGTTGCCCGC
GTCTTCCGCTACCCAGACCTCGGAGACCTGGCTGAGCTGCGCCGCCTGCCGCATTGCTGC
GACCATCGGTGCTGCAACCCCTACCACTACAGTCGCCTCTGTGAGCCCGAAACCCCTCCT
CCTCCTTACAGCCGGATAGCGATGGATGACGTCAAACATAAAGAACAAGACGAGAAGACA
GAAGATGCTCGGAGAACTGACCACGAGCGGCTTGCCACGGGCTCACTGGCTACTGACGGA
GAAGAGCGTCAGAGCTGGGAGAGCGAGTGGTGCCGGCTGGCGTACTGGGAGCTGACCCAG
CGTGTCGGGAGGCAGCTGGGGGTGAGAGTGCGCGCGGTGGACGTGTTCGCCGGCGCCGGG
GGTAGCTGCGGCCAGGGGAGACACGGCCTTTGTGTGGACGACCTCGGAGACAGGGGCACG
CAGGTGCGGAAGACCCGGGCGAAGATAGGTCTCGGCGTGACGCTATCCTTGGAGGCGGAC
GGCGTCTGGTTGTACAACCGCAGTCAAGAGCCAGTGTTCGTGTCGTCGCCGGCGCTGGAC
GCGGCCGCTGCCAAAGCCCTCCTGGTGTGGCGCGTCGCCCCGGGTCATTGTCTGTGCGTT
TTCGACCCCGGGGCTCCACCGCCCGCCCTGTCTCTGCCGCACGTCGGCCCCGTCGACAAC
ACCTCCGTCAGGATCTCCTTCGCCAAGGGCTGGGGTCCCAAATATTCCAGGCGTGACGTC
ACCGCCTGTCCCTGCTGGTTGGAAGTGCTGCTAGCGCCCGCCAGCTGA
Protein sequence:
MCREANVAPAPRPARLSADTSHSRYNSDVFAATPSAAMSTAAARRPRRRPRLTGVLRLVS
TLAGVTPDGPATEPRRHGDDATTTRRRSTDANLMQAQSEDSVSRVSMAPHAHTCAHLTPP
VAPDDPPVPLTPGHLLARRPAAPLHTGRGCQPEERCAVARVFRYPDLGDLAELRRLPHCC
DHRCCNPYHYSRLCEPETPPPPYSRIAMDDVKHKEQDEKTEDARRTDHERLATGSLATDG
EERQSWESEWCRLAYWELTQRVGRQLGVRVRAVDVFAGAGGSCGQGRHGLCVDDLGDRGT
QVRKTRAKIGLGVTLSLEADGVWLYNRSQEPVFVSSPALDAAAAKALLVWRVAPGHCLCV
FDPGAPPPALSLPHVGPVDNTSVRISFAKGWGPKYSRRDVTACPCWLEVLLAPAS