| New model in OGS2.0 | DPOGS205070 |
|---|---|
| Genomic Position | scaffold681:- 27724-36280 |
| See gene structure | |
| CDS Length | 3960 |
| Paired RNAseq reads | 3515 |
| Single RNAseq reads | 8370 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006813 (0.0) |
| Best Drosophila hit | Nup154, isoform A (0.0) |
| Best Human hit | nuclear pore complex protein Nup155 isoform 1 (2e-110) |
| Best NR hit (blastp) | PREDICTED: similar to nuclear pore complex protein nup154 [Nasonia vitripennis] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to nuclear pore complex protein nup154 [Nasonia vitripennis] (0.0) |
| GeneOntology terms | GO:0005515 protein binding GO:0005643 nuclear pore GO:0017056 structural constituent of nuclear pore GO:0006913 nucleocytoplasmic transport |
| InterPro families | IPR004870 Nucleoporin, Nup155-like IPR014908 Nucleoporin, Nup133/Nup155-like, N-terminal IPR007187 Nucleoporin, Nup133/Nup155-like, C-terminal |
| Orthology group | MCL13483 |
Nucleotide sequence:
ATGCAACTCGAATGCTTGGAACTTGCGGGTTGCACTCTCGATCGGTATATCAGTGCCGAC
AATTCCCGCCCTTCGTTTCTTGAGATAACTGGTATAGCAGCCCAAGGAAGTCCAACATGC
AGTGGTCTGAATGCAGGGGACTACAGGAATTTAGCATCATTGCTAAATCATCCAAATTTA
TCTCTTTTGAAAATTTTAAACAAAGTTCCTCTGCCCCCAGAGATAATGGAACACTTTGCT
CATATGCAATGTCACTGTTTAATGGGAGTGTTTCCAGAAATTAGCCGAGTATGGCTTGCT
ATAGACAGTAATATATATGTATGGGCCTTTGAGCATGGGAGTGATGTGGCCTATTTTGAT
GGTCTAGGTGAAACTATTGTTAGTGTTGGCCTCGTCAAGCCTAAATCTGGTGTCTTCCAG
AATTTTGTAAAATATTTACTAGTTCTTACAACTACAGTTGAAATTGTTGTATTAGGGGTC
ACATTTTCAAGTAGTAAACAAGATGGCACTGCAGAACTTGAAGAAATTCATCTTGTCCCA
GAACCTGTATTTGTTTTGCCTACTGATGGTGTTTCTATGCTATGTGTAAAGTCTACATCG
AAAGGTAGAATATTTATGGGAGGAAAGGATGGCTGCTTATATGAGATAACTTACCAGGCA
CAATTAGGTTGGTTCGGAAAACATTGCAAGAAAGTGAATCATTCAACCAGTGCATTGTCA
TTCCTAGTCCCTTCATTCCTTAATGCTGCACTATATGATGAAGATTCCATAGTTAAAATT
GAAGTTGATAACTCTCGTCACATTCTGTATACGTTAAGTGAGAAAGGATGTATAGAAGTG
TTCGATTTAGGCAGTGACGGTGAGGGATTTAGTAAAGTGGTGAGATTGAATCAAGGGAAA
ATTGTATCATTGTCTGTGGATATTGTGAAAACGCTCGAGCCTAATAATTTTAAGCCAGTT
ATAGCTATATCAGCTGTAGATGAGTCAGAATCGGAACATTTGAATTTGGTTGCCGTCACA
CAAACAGGGGCAAGATTATATTTTAGTGCTGGAACTGGAGACTCCAGTCAAGGTGGACCA
CAGAGGCCTCAGTACTTGACATTGCTACATGTAAGACTCCCTCCTGGTTTTACCCCAAAT
GCATCAGTATTAAAACCCAAACAAGTGCACAGCGCAGTATACGACAATGGTACCCTAGTG
ATGGTATGTTCGTCCAGCGGTGGGGAAGAGGAATCATTGTGGTGTTTATCTCGAGTCCTA
TCTGCTGCTGGCTTCAGCGAGGCTCACACAGCTCTACCATTAGACGGACCGGCCTGGGCT
CTCACACCACTACCGCCAACACATTCAGACTTTTTATCTCCAGCGCTGCTTGCTAAAAGA
GAGGTGTGGTCGTCGTCTCGTTGGGCGGTGGTGAGTGCTTGGGGCGCCGCGGTGCTAGCG
ACGGGGGCGGCGCCGGATGTATTACGATCTCTGTTAAGGGACTACCGCGGACCGGACGCA
CAACCTGTCAAGGATATGTTTCAGCTCCACGGTATCGACCAGGCTTGTGCGTGTGCACTT
TACTTGGCGTGCGAGGACACTAGTGACATGACAGTGAGCGAGTGGGCGGCGCGGGCGTTC
TTCCTATACGGCAGTCAAGTAGCACCTTCACCGCTATACCAACAGACATCACAAATGCCT
TCTATTAATTCACCGAAATTCTCACCGCGCCAAGTATCAACACCGATGTCAACGAGACCC
CAGGACCAAATGCGTATGAACCAAATGAACCAGTCGTACCAACAGCAGCAGATGAACCAA
TCGATGGCAGTCCAGAACCAGACCATGATGCCCTCCTACCAACAGAATATGATGAGCCCC
ACACCATTCAATCAATCGTCGTTTAACATGACCCAGCAGCCGAGAGATAATTTCCCCCTA
CAAATAGAATACAGTGCAAAACACAACGGAGTATACATTTACGTCGGTAGAATCCTGAGT
CCTATATGGAATTTGAAATGTGTAACGAAGTCAATGACGCCGGATAATAAGGAGTTTATG
TCGAGTAATGTAACGGGCGAAGACTGCGCGTATATAGCGAAGAAGTTGCAACGAGTGTCC
GCTTTCATGCAACGAGTGGGCGCGCCGCCTCATACAGAAGAACAGGCGTCTTTGCACGCG
TTGAAAATGTTCATTACTATGGCAATTGAGATGTTGAGCTTATGGAAAGTTTTGTGCGAG
CACCAATTCCATGTGATAGCTGCGAGTCTGCCGTCTGAACAACAAACGGCTTTACAAGCG
GCAAGTTTCAGAGAACTGCTAGTTGGTGGACAGGAGGTGGCGTGTCTTCTCCTCGGATCT
CTCGTGGCTGGTTATTTGAGAGATAATGCATCAGTGGATGGCATCTCACAGAAACTGAGG
CAGCTCTGCCCAACGCTATATAGACAGGAGGATGCTACATGTTCTAAAGCCAATGAATTG
TTAATATTCGCTAAACAACAGAAGAATCCCGAAGAACGTGAGGAAATGTTACATCAGGCA
TTAAAACTTTGCAAGGATGTGGCGCCAAATGTAAACTTACCACTGGTCTGTTCGAAACTG
GTATCAGCAGGGTTCTATACTGGCGTAGTAGAACTGTGCGAGGCCTGTGCCAGTAAGTTA
GACCCGCAGGATAAAGCCGTTTATTACTACAAGAGCGACCAACCCTCCCAAGATAGGGAG
GGACATTTGGCTTATTATAGAAGAATGGAGATTTATCGCGAAGTGTGCTGTGCGCTGGAG
CGACTGTACGAGCGTAGTGCTGAAGGTACCGGCACTCCGCCCTCAGACACACACGCTTTG
TCACCAGCAGACGCCAACTACCAGGGTAGGAAATTGGTGTGGGACTGTTTATGCCGAGAC
GATGAGCTATTACACGTCGCAGTGTACGAGTGGCTGGTTTCTAAAAATTTGGGTTCAGAA
CTGTTGTCTTTACCGGGTGCTCCGCCCGCGTCGCTTCGTACATACCTGACTGCGGCGGCC
CGTAGTGCGCCTGCGCCCGCTGCCCTACTTCTTCTCGACCTTCTGTGGAAGGTACTAGAA
AAAGCTGGGGATCACCTGGCAGCGGCAAACGTTCTGGAGGGACTTGCTACTAAACCTGGC
ACGGGCGCGACTCTAAGTCAGCGTATGTCGTGGGTGTCAGCGGGTGTAGTGTGCGTCCGC
GGTGCCGGCGGGCGGGCGGCGGGCGGCTCGGAGCTGCTCCGTCGTCTGGAGGAGGCGGCG
GAGGTGGCGCGAGTGCAGGCGGCCGTGAGAGCTGCCATGCGCTCAGTCCACTCTTCCGCC
CCACCTCATTTGCTTCAACGGTTGGACGATGAGCTGCTGGAGATCACTCAGCTCTACGAA
GAGTATGCCGACCGTTATAACCTGTGGGAGTGTAAGCTGGCAATAGTACAATGTTCCGGT
CACAATGACGCCCTACTCGTAGAAAATATTTGGAGCAACATTCTAGCTGAAGCGGAAGCC
GCTACTCGTAACCTGCCGACGCCAGATGAAAGACTGGCTTCAGTACTGAGCAAGCTGACT
ACCCTCGGCCGGGAGTATGTTAATACTGGTCATTGCTTCCCACTGTATTTCATCGTCCGA
CAATTAGAAATAATGAACTGCAAGTTGCAAGCCGACAAGAGCATGGTATTTAAAGCTATA
TTGAGTATCGGAGTGTCGTTGGAACAGGTTTTAGATATTTATATCAAATTGGTGAGTGTG
AACGAGCGTGTATGGCTTGGCTGTGGAGACGAATCGCACGTGTGCGCCTGTGCCGCTCTA
CTCCTGAACGCTGCTCGTGCCGACCTGCTGCCTCTGCCGCCAGCGCCGCGACGAAGAGCC
CTAACTCGCTGTAAGGACCTGCATGAAGCGGCTTTATCCGCGCTACAGAGCCGTCCGAAT
ACACAACACCTCATTGATAAGTTAACAGTTGCGCAGGCGCATCTTGACCGGATGGATTGA
Protein sequence:
MQLECLELAGCTLDRYISADNSRPSFLEITGIAAQGSPTCSGLNAGDYRNLASLLNHPNL
SLLKILNKVPLPPEIMEHFAHMQCHCLMGVFPEISRVWLAIDSNIYVWAFEHGSDVAYFD
GLGETIVSVGLVKPKSGVFQNFVKYLLVLTTTVEIVVLGVTFSSSKQDGTAELEEIHLVP
EPVFVLPTDGVSMLCVKSTSKGRIFMGGKDGCLYEITYQAQLGWFGKHCKKVNHSTSALS
FLVPSFLNAALYDEDSIVKIEVDNSRHILYTLSEKGCIEVFDLGSDGEGFSKVVRLNQGK
IVSLSVDIVKTLEPNNFKPVIAISAVDESESEHLNLVAVTQTGARLYFSAGTGDSSQGGP
QRPQYLTLLHVRLPPGFTPNASVLKPKQVHSAVYDNGTLVMVCSSSGGEEESLWCLSRVL
SAAGFSEAHTALPLDGPAWALTPLPPTHSDFLSPALLAKREVWSSSRWAVVSAWGAAVLA
TGAAPDVLRSLLRDYRGPDAQPVKDMFQLHGIDQACACALYLACEDTSDMTVSEWAARAF
FLYGSQVAPSPLYQQTSQMPSINSPKFSPRQVSTPMSTRPQDQMRMNQMNQSYQQQQMNQ
SMAVQNQTMMPSYQQNMMSPTPFNQSSFNMTQQPRDNFPLQIEYSAKHNGVYIYVGRILS
PIWNLKCVTKSMTPDNKEFMSSNVTGEDCAYIAKKLQRVSAFMQRVGAPPHTEEQASLHA
LKMFITMAIEMLSLWKVLCEHQFHVIAASLPSEQQTALQAASFRELLVGGQEVACLLLGS
LVAGYLRDNASVDGISQKLRQLCPTLYRQEDATCSKANELLIFAKQQKNPEEREEMLHQA
LKLCKDVAPNVNLPLVCSKLVSAGFYTGVVELCEACASKLDPQDKAVYYYKSDQPSQDRE
GHLAYYRRMEIYREVCCALERLYERSAEGTGTPPSDTHALSPADANYQGRKLVWDCLCRD
DELLHVAVYEWLVSKNLGSELLSLPGAPPASLRTYLTAAARSAPAPAALLLLDLLWKVLE
KAGDHLAAANVLEGLATKPGTGATLSQRMSWVSAGVVCVRGAGGRAAGGSELLRRLEEAA
EVARVQAAVRAAMRSVHSSAPPHLLQRLDDELLEITQLYEEYADRYNLWECKLAIVQCSG
HNDALLVENIWSNILAEAEAATRNLPTPDERLASVLSKLTTLGREYVNTGHCFPLYFIVR
QLEIMNCKLQADKSMVFKAILSIGVSLEQVLDIYIKLVSVNERVWLGCGDESHVCACAAL
LLNAARADLLPLPPAPRRRALTRCKDLHEAALSALQSRPNTQHLIDKLTVAQAHLDRMD